Alternatives and similar repositories for nf-neuro

Users that are interested in nf-neuro are comparing it to the libraries listed below

• nipy / nitransforms
  a standalone fork of nipy/nibabel#656
  ☆33Updated last week
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆45Updated 3 weeks ago
• gdevenyi / NeuroAnsible
  An ansible playbook to deploy a complete standalone neuroimaging workstation
  ☆25Updated 3 months ago
• CoBrALab / libBIDS.sh
  ☆20Updated this week
• chrisgorgo / alleninf
  Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
  ☆31Updated 7 years ago
• neurobagel / documentation
  The neurobagel documentation
  ☆14Updated last week
• neurodesk / neurocontainers
  The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a conta…
  ☆33Updated last week
• SNG-Newy / eigenstrapping
  A toolbox for generating spatial null maps using geometric eigenmodes
  ☆17Updated last month
• jordandekraker / Hippocampal_AutoTop
  ☆10Updated 4 years ago
• CoBrALab / qbatch
  ☆33Updated last month
• nipreps / nirodents
  ☆13Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 3 months ago
• CyclotronResearchCentre / bidsme
  Flexible bidsificator for multimodal datasets
  ☆10Updated last month
• tee-ar-ex / trx-python
  Python implementation of the TRX file format
  ☆23Updated last year
• SebastianoF / bruker2nifti
  Medical image format converter: from raw Bruker ParaVision to nifti.
  ☆31Updated last year
• boutiques / boutiques
  A cross-platform descriptive command-line framework for applications
  ☆63Updated last week
• alegiac95 / Imaging-transcriptomics
  A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
  ☆24Updated last year
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated last year
• NDAR / nda-tools
  Python package for interacting with NDA web services. Used to validate, submit, and download data to and from NDA.
  ☆61Updated last week
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆32Updated 3 weeks ago
• nipype / pydra
  Pydra Dataflow Engine
  ☆129Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 weeks ago
• niksirbi / brain4views
  Plotting 4 brain surface views on a single matplotlib figure
  ☆12Updated 3 years ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆43Updated last year
• ncullen93 / neuroCombat
  Harmonizing neuroimaging data across scanners and sites
  ☆35Updated 5 years ago
• neurodesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆52Updated last week
• childmindresearch / bids2table
  Index BIDS datasets fast, locally or in the cloud
  ☆18Updated last month
• SIMEXP / niak
  GNU Octave library for connectivity analysis in large fMRI datasets
  ☆30Updated 2 years ago
• nipoppy / nipoppy
  Lightweight framework for neuroimaging-clinical data organization/processing
  ☆34Updated this week
• ntustison / ANTsXMouseBrainMapping
  The ANTsX Ecosystem for Mapping the Mouse Brain
  ☆14Updated last month