Alternatives and similar repositories for neurocontainers

Users that are interested in neurocontainers are comparing it to the libraries listed below

• neurodesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆49Updated this week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆70Updated last year
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆100Updated last week
• neurabenn / precon_all
  precon_all surface pipline
  ☆27Updated 3 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated 2 weeks ago
• PRIME-RE / RheMAP
  Non-linear warps between common rhesus macaque brain templates
  ☆26Updated 2 months ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆42Updated last year
• brainlife / ezbids
  A web service for semi-automated conversion of raw imaging data to BIDS
  ☆31Updated last month
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 9 months ago
• nipy / nitransforms
  a standalone fork of nipy/nibabel#656
  ☆33Updated 2 weeks ago
• neurodesk / neurocommand
  A flexible, scalable, and easy to use data analysis environment for reproducible neuroimaging
  ☆40Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 2 weeks ago
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆24Updated last month
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 2 months ago
• grandjeanlab / MultiRat
  A Rat fMRI multi-center study
  ☆33Updated 3 years ago
• styx-api / niwrap
  Modern Neuroimaging Made Simple
  ☆20Updated this week
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• IBT-FMI / SAMRI
  Small Animal Magnetic Resonance Imaging via Python.
  ☆43Updated last year
• nipreps / nibabies
  fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
  ☆32Updated this week
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆71Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆87Updated 2 weeks ago
• neurospin / pypreclin
  ☆13Updated 5 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆84Updated this week
• MICA-MNI / micapipe
  micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…
  ☆108Updated last week
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆64Updated 2 years ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆60Updated 11 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆68Updated 3 weeks ago
• QSMxT / QSMxT
  QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.
  ☆50Updated this week
• suyashdb / hcp2bids
  To convert Human Connectome projects(HCP) data to BIDS std
  ☆29Updated 3 years ago