The plug-and-play, browser-accessible, containerised data analysis environment.
☆62Mar 27, 2026Updated this week
Alternatives and similar repositories for neurodesktop
Users that are interested in neurodesktop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a conta…☆35Updated this week
- A flexible, scalable, and easy to use data analysis environment for reproducible neuroimaging☆44Updated this week
- Julia toolbox for Quantitative Susceptibility Mapping☆17Feb 15, 2024Updated 2 years ago
- Matlab for NIFTI support☆10Dec 26, 2018Updated 7 years ago
- Estimating Absolute-Phase Maps Using ESPIRiT and Virtual Conjugate Coils☆14Aug 13, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A python package for the automatic conversion of EEG datasets to the BIDS standard, with a focus on making the most out of metadata.☆13Feb 26, 2026Updated last month
- precon_all surface pipline☆29Dec 19, 2025Updated 3 months ago
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆19May 30, 2025Updated 10 months ago
- ☆13Feb 3, 2020Updated 6 years ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆17May 22, 2024Updated last year
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆44Updated this week
- Quantitative MRI toolbox in Python☆13Dec 19, 2024Updated last year
- a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.☆434Mar 12, 2026Updated 2 weeks ago
- Network Modification Tool☆18Mar 12, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Example codes and data for VFA-EPTI work☆11Dec 30, 2020Updated 5 years ago
- ☆17Mar 15, 2026Updated 2 weeks ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆54Feb 11, 2026Updated last month
- MRI phase combination algorithms for array-coils☆20Jul 20, 2025Updated 8 months ago
- Code for paper "Robust SENSE reconstruction of simultaneous multislice EPI with low-rank enhanced coil sensitivity calibration and slice-…☆12Apr 14, 2024Updated last year
- Cortical neuroimaging visualization in Python☆253Dec 15, 2023Updated 2 years ago
- Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset☆11Nov 18, 2015Updated 10 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆15Jul 1, 2024Updated last year
- Documented example codes for the calculation of Extended Phase Graphs in MRI.☆29Aug 30, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A repository for the Quantitative Imaging Toolkit (QIT)☆25Mar 11, 2026Updated 2 weeks ago
- Automated installation of neuro-imaging software on a Linux Mint 20 or Ubuntu 20.04 system☆11Dec 28, 2023Updated 2 years ago
- Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…☆15Oct 20, 2021Updated 4 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Mar 17, 2021Updated 5 years ago
- https://doi.org/10.1101/2021.02.22.432228☆10Nov 24, 2021Updated 4 years ago
- Generate custom Docker and Singularity images, and minimize existing containers☆355Updated this week
- A generally applicable whole-brain preprocessing toolbox for mice and rats☆12Jul 11, 2024Updated last year
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆163Updated this week
- Demo of MRF processing pipeline used for data presented at ISMRM 2022 (program number 53)☆10May 5, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆194Mar 6, 2026Updated 3 weeks ago
- 论文代码实现：”High-quality MR Fingerprinting Reconstruction using Structured Low-rank Matrix Completion and Subspace Projection“☆13May 29, 2023Updated 2 years ago
- A python based MRI reconstruction toolbox with compressed sensing, parallel imaging and machine-learning functions☆14Feb 7, 2018Updated 8 years ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆151Mar 21, 2026Updated last week
- GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.☆23Feb 18, 2026Updated last month
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆109Updated this week
- Didactic examples that accompany the 2018 ISMRM educational lecture "How to Jump-Start Your Deep Learning Research"☆20Jun 17, 2018Updated 7 years ago