neurodesk / neurodesktopLinks
The plug-and-play, browser-accessible, containerised data analysis environment.
☆57Updated this week
Alternatives and similar repositories for neurodesktop
Users that are interested in neurodesktop are comparing it to the libraries listed below
Sorting:
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆62Updated last year
- Processing tools for high-resolution neuroimaging☆73Updated last month
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆107Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated 2 months ago
- precon_all surface pipline☆29Updated last month
- Preprocessing of diffusion MRI☆171Updated last month
- BIDS app wrapping recon-all from FreeSurfer☆44Updated last month
- The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a conta…☆35Updated this week
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆43Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆77Updated last week
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆37Updated this week
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆105Updated 2 months ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆70Updated 2 years ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆58Updated this week
- The TemplateFlow Archive - A DataLad super-dataset☆93Updated 2 weeks ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆75Updated 3 weeks ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆64Updated 2 months ago
- QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.☆55Updated 2 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Updated this week
- ☆39Updated 3 years ago
- Flexible DICOM conversion into structured directory layouts☆274Updated this week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆93Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆71Updated 2 months ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆48Updated this week
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆101Updated 10 months ago
- A web service for semi-automated conversion of raw imaging data to BIDS☆34Updated 6 months ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆88Updated this week
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 5 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆111Updated last week