neurodesk / neurodesktopLinks
The plug-and-play, browser-accessible, containerised data analysis environment.
☆54Updated last week
Alternatives and similar repositories for neurodesktop
Users that are interested in neurodesktop are comparing it to the libraries listed below
Sorting:
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆106Updated this week
- Processing tools for high-resolution neuroimaging☆73Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated last month
- Stand alone fMRI software suite for layer-fMRI analyses.☆104Updated 3 weeks ago
- The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a conta…☆34Updated this week
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆60Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆75Updated 2 weeks ago
- BIDS app wrapping recon-all from FreeSurfer☆43Updated 2 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- Preprocessing of diffusion MRI☆169Updated last week
- MP2RAGE Scripts - T1 map correction & Background noise removal☆69Updated 2 years ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆55Updated last month
- niimath - a clone of fslmaths. Try the live demo:☆71Updated last month
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆32Updated this week
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆36Updated last month
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆74Updated 5 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆67Updated 2 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆158Updated this week
- precon_all surface pipline☆29Updated 6 months ago
- QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.☆53Updated this week
- The TemplateFlow Archive - A DataLad super-dataset☆93Updated 3 weeks ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆87Updated this week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆35Updated last month
- A web service for semi-automated conversion of raw imaging data to BIDS☆34Updated 4 months ago
- ☆39Updated 3 years ago
- Scripts to prepare MP2RAGE for Freesurfer☆29Updated 2 years ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 5 years ago
- BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data☆47Updated last week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆78Updated last week
- Utility functions for working with DICOM and BIDS neuroimaging data☆64Updated last month