Alternatives and similar repositories for kinfitr

Users that are interested in kinfitr are comparing it to the libraries listed below

• sulantha2006 / VoxelStats
  A MATLAB package for multi-modal voxel-wise brain image analysis
  ☆15Updated 2 years ago
• ANTsX / ANTsR
  R interface to the ANTs biomedical image processing library
  ☆136Updated this week
• dfsp-spirit / fsbrain
  R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphom…
  ☆74Updated last month
• ucl-pond / pySuStaIn
  Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.
  ☆174Updated last month
• tkkarjal / magia
  Automated brain PET analysis pipeline
  ☆27Updated 2 years ago
• muschellij2 / fslr
  FSL-R Interface package
  ☆44Updated last month
• dfsp-spirit / freesurferformats
  GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.
  ☆23Updated last month
• Jfortin1 / neuroCombat_Rpackage
  neuroCombat R package
  ☆26Updated 10 months ago
• APPIAN-PET / APPIAN
  APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET …
  ☆42Updated last year
• chrisgorgo / alleninf
  Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
  ☆31Updated 7 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• ysu001 / PUP
  PET Unified Pipeline
  ☆23Updated 4 years ago
• ucl-pond / SuStaInMatlab
  Subtype and Stage Inference [Young+, Nature Communications 2018]
  ☆13Updated 4 years ago
• Jfortin1 / MNITemplate
  MNI152 Template
  ☆47Updated 5 years ago
• Jfortin1 / EveTemplate
  JHU-MNI-ss (Eve) Template
  ☆14Updated 5 years ago
• Jfortin1 / RAVEL
  Intensity normalization of structural MRIs using RAVEL
  ☆30Updated 2 years ago
• carpentries-incubator / SDC-BIDS-dMRI
  Introduction to dMRI
  ☆26Updated this week
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆25Updated last month
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated last year
• martin3141 / spant
  Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data
  ☆27Updated this week
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• pBFSLab / DeepPrep
  DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
  ☆99Updated 2 months ago
• alegiac95 / Imaging-transcriptomics
  A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
  ☆24Updated last year
• slamballais / QDECR
  The QDECR package for vertex-wise analyses in R
  ☆12Updated 2 years ago
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆31Updated last month
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆32Updated 3 weeks ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆97Updated 6 months ago
• mvgolub / FW-DTI-Beltrami
  ☆12Updated 2 years ago
• jcbeer / longCombat
  R package to implement longitudinal ComBat: A method for harmonizing multi-batch longitudinal data
  ☆35Updated last month
• muschellij2 / Eve_Atlas
  Eve Atlas used for segmentations
  ☆16Updated 4 years ago