A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
☆28Apr 5, 2026Updated this week
Alternatives and similar repositories for Imaging-transcriptomics
Users that are interested in Imaging-transcriptomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆19May 30, 2025Updated 10 months ago
- Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.☆33Sep 7, 2018Updated 7 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆15Jul 1, 2024Updated last year
- ☆51Nov 23, 2021Updated 4 years ago
- Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)☆17Nov 5, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆114Sep 3, 2024Updated last year
- A toolbox for custom data visualization in the subcortex and cerebellum☆55Mar 10, 2026Updated last month
- Segmentation tool for the delineation and volumetric quantification of the choroid plexus☆23Jun 2, 2025Updated 10 months ago
- Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.☆52Jun 29, 2023Updated 2 years ago
- Brain Cell Type Specific Gene Expression Analysis☆17Dec 27, 2023Updated 2 years ago
- ☆13Apr 11, 2023Updated 3 years ago
- agent-based S-I-R model for neurodegeneration☆21Mar 1, 2022Updated 4 years ago
- https://doi.org/10.1101/2021.02.22.432228☆10Nov 24, 2021Updated 4 years ago
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆67Feb 26, 2026Updated last month
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Plot the boundaries of ROIs on a surface☆73Apr 8, 2025Updated last year
- This repository contains all code for the BLMM toolbox.☆20Jan 31, 2024Updated 2 years ago
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆14Jan 12, 2025Updated last year
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Mar 20, 2026Updated 3 weeks ago
- DTI-ALPS: diffusion tensor imaging along the perivascular space☆21Sep 15, 2024Updated last year
- Python interface for generating coordinate tables and region labels from statistical MRI images☆121Mar 16, 2026Updated 3 weeks ago
- Morphometric similarity in psychosis- data and code☆54May 8, 2019Updated 6 years ago
- Code and documentation supporting Markello & Misic, 2021, "Comparing spatial null models for brain maps" (NeuroImage)☆25Apr 25, 2021Updated 4 years ago
- Plotting tool for brain atlases, in ggplot☆257Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- perivascular space segmentation☆17Sep 2, 2022Updated 3 years ago
- ggseg3d R package for visualising brain atlases through plotly☆44Updated this week
- A toolbox for comparing brain maps☆320Apr 23, 2025Updated 11 months ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆119Apr 3, 2026Updated last week
- The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …☆177Jan 15, 2026Updated 2 months ago
- ☆729Mar 25, 2026Updated 2 weeks ago
- Coordinate- and image-based meta-analysis in Python☆209Updated this week
- ☆216Jun 23, 2023Updated 2 years ago
- Code supporting Hansen et al., 2021, Nature Human Behaviour "Mapping gene transcription and neurocognition across human neocortex".☆24Sep 22, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A prediction-based extension of network-based statistics.☆38Jan 2, 2026Updated 3 months ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆21Apr 8, 2025Updated last year
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆245Feb 9, 2026Updated 2 months ago
- BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customizat…☆62Mar 17, 2026Updated 3 weeks ago
- Data and analysis code to reproduce the NSPN Manuscript "Adolescence is associated with genomically patterned consolidation of the hubs o…☆43Feb 23, 2017Updated 9 years ago
- A Python implementation of Partial Least Squares (PLS) decomposition☆79Sep 18, 2025Updated 6 months ago
- Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon☆31Jan 25, 2019Updated 7 years ago