Psivant / stormm
☆42Updated 3 months ago
Alternatives and similar repositories for stormm:
Users that are interested in stormm are comparing it to the libraries listed below
- A comprehensive toolkit for predicting free energies☆52Updated 3 months ago
- Automated tools for the generation of bespoke SMIRNOFF format parameters for individual molecules.☆66Updated last week
- Package for consistent reporting of relative free energy results☆39Updated 3 weeks ago
- Benchmark sets for binding free energy calculations: Perpetual review paper, discussion, datasets, and standards☆43Updated 3 years ago
- Enable cheminformatics and quantum chemistry☆72Updated last year
- A physical property evaluation toolkit from the Open Forcefield Consortium.☆56Updated this week
- ☆64Updated last year
- OpenMM plugin to interface with PLUMED☆66Updated last month
- A Python module for carrying out GCMC insertions and deletions of water molecules in OpenMM.☆66Updated last year
- MDANCE is a flexible n-ary clustering package for all applications.☆54Updated last month
- 📐 Symmetry-corrected RMSD in Python☆94Updated 2 weeks ago
- Ensembler is a python package that provides fast and easy access to 1D and 2D model system simulations. It can be used for method develop…☆53Updated 11 months ago
- An OpenMM plugin that implements the Alchemical Transfer Potential☆40Updated last year
- Partial Charge assignment for Molecular Dynamics☆19Updated last month
- Materials for 2023 workshop at CCPBioSim Training Week https://www.ccpbiosim.ac.uk/events/upcoming-events/eventdetail/104/-/training-week☆30Updated last year
- A machine learned Molecular Mechanics force field with integration into GROMACS and OpenMM☆39Updated 2 weeks ago
- ☆43Updated 3 years ago
- RESP with inter- and intra-molecular constraints in Psi4.☆31Updated last year
- Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..☆44Updated 4 years ago
- Density based object completion over PBC.☆29Updated 4 months ago
- Standalone charge assignment from Espaloma framework.☆39Updated 9 months ago
- High level API for using machine learning models in OpenMM simulations☆101Updated last month
- mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data☆32Updated 3 weeks ago
- Enhanced sampling methods for molecular dynamics simulations☆36Updated 2 years ago
- Robust Equilibration Detection☆20Updated 2 months ago
- Given an RDKit molecule that does not sanitise, correct it until it does☆41Updated last year
- Physical validation of molecular simulations☆56Updated last week
- A. Alenaizan's restricted electrostatic potential (RESP) plugin to Psi4☆32Updated 5 years ago
- Set up relative free energy calculations using a common scaffold☆22Updated 2 weeks ago
- Best practice document for alchemical free energy calculations going to livecoms journal☆71Updated 2 months ago