ogchen / nanofoldLinks
A nano protein structure prediction model based on DeepMind's AlphaFold paper
☆28Updated 11 months ago
Alternatives and similar repositories for nanofold
Users that are interested in nanofold are comparing it to the libraries listed below
Sorting:
- Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders☆180Updated 4 months ago
- Pretraining Code for METAGENE-1☆66Updated 5 months ago
- ☆102Updated 2 weeks ago
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆72Updated last week
- A Software Framework Enabling Modular Interchange of Language Agents, Environments, and Optimizers☆87Updated this week
- Your favourite classical machine learning algos on the GPU/TPU☆20Updated 5 months ago
- an open source reproduction of NVIDIA's nGPT (Normalized Transformer with Representation Learning on the Hypersphere)☆100Updated 3 months ago
- ☆60Updated last year
- alternative way to calculating self attention☆18Updated last year
- An aviary-based data science agent based on jupyter notebooks☆29Updated this week
- Pretraining infrastructure for multi-hybrid AI model architectures☆166Updated 3 weeks ago
- My own attempt at a long context genomics model, leveraging recent advances in long context attention modeling (Flash Attention + other h…☆53Updated last year
- Minimal AlphaFold☆53Updated 9 months ago
- Explorations into whether a transformer with RL can direct a genetic algorithm to converge faster☆70Updated 2 weeks ago
- Exploration into the Firefly algorithm in Pytorch☆39Updated 3 months ago
- Rust Implementation of micrograd☆51Updated 11 months ago
- A Language Agent Gym with Challenging Scientific Tasks☆183Updated last week
- Protein language model customized for antibodies☆133Updated 2 months ago
- look how they massacred my boy☆63Updated 7 months ago
- The simplest, fastest repository for training/finetuning medium-sized xLSTMs.☆41Updated last year
- open source alpha evolve☆62Updated 2 weeks ago
- ☆21Updated 2 months ago
- A single repo with all scripts and utils to train / fine-tune the Mamba model with or without FIM☆54Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆122Updated last month
- Implementation of the Pairformer model used in AlphaFold 3☆12Updated this week
- ProtMamba: a homology-aware but alignment-free protein state space model☆66Updated this week
- ☆80Updated last year
- ☆27Updated 10 months ago
- Pytorch implementation of a simple way to enable (Stochastic) Frame Averaging for any network☆50Updated 10 months ago
- Explorations into the proposal from the paper "Grokfast, Accelerated Grokking by Amplifying Slow Gradients"☆100Updated 5 months ago