cbib / TrialMatchAILinks
TrialMatchAI aims to seamlessly match cancer patients to clinical trials based on their unique genomic and clinical profiles using AI
☆18Updated last month
Alternatives and similar repositories for TrialMatchAI
Users that are interested in TrialMatchAI are comparing it to the libraries listed below
Sorting:
- Batch download articles based on PMID (Pubmed ID)☆132Updated 2 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆85Updated 6 months ago
- ☆32Updated 2 years ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆53Updated last week
- Data structures and code to read/write BioC XML and Json.☆33Updated 2 years ago
- Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.☆139Updated 3 months ago
- PhenoTagger☆64Updated last year
- Python library for working with BioC files☆13Updated 7 years ago
- AIONER☆62Updated last year
- A framework for keeping biomedical text mining result up-to-date☆42Updated 5 years ago
- ☆24Updated 2 years ago
- Generate safety signal statistics from FDA FAERS data☆52Updated last year
- Literature mining for T cell relations☆23Updated 3 years ago
- A combined deep learning tool for automated recognition of human phenotype ontology☆27Updated 3 years ago
- a module to calculate the MeSH similarity☆27Updated 4 years ago
- Python script that downloads all pubmed abstracts corresponding to user-specified keyword searches, by performing automated NCBI E-utilit…☆32Updated 5 years ago
- A full-text article retrieval pipeline for biomedical literature.☆22Updated 3 weeks ago
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆29Updated 3 years ago
- Repository for student projects within biomedical text mining from Lund University☆57Updated 2 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 4 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆201Updated last year
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆77Updated 5 months ago
- Biomedical wordlists (of drugs, genes, etc) for several text mining projects☆18Updated 2 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- ☆42Updated 5 years ago
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆37Updated 2 years ago
- ☆66Updated 3 years ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆33Updated 8 years ago
- Explainable AI for Bioinformatics☆126Updated 2 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago