Code and Data for Advancing real-time infectious disease forecasting using large language models
☆52Jun 27, 2025Updated 10 months ago
Alternatives and similar repositories for PandemicLLM
Users that are interested in PandemicLLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Influpaint : Inpainting denoising diffusion probabilistic models for infectious disease (such as influenza) forecasting☆22May 1, 2026Updated last week
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of incident respiratory COVID-19 hospital a…☆24Updated this week
- A simple Python library for compartment models☆11Aug 23, 2021Updated 4 years ago
- Python SIR-x model implementation☆10Dec 8, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests.☆14Jul 19, 2023Updated 2 years ago
- ☆23Dec 13, 2023Updated 2 years ago
- ☆19Oct 23, 2025Updated 6 months ago
- EPIDEMIC is an easy-to-run Matlab/Octave educational toolkit for epidemiological analysis.☆18Apr 4, 2025Updated last year
- Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"☆72Oct 11, 2023Updated 2 years ago
- This notebook is related to the paper: Machine learning in physics: a short guide, to appear on Europhysics Letters (EPL).☆15Jul 16, 2024Updated last year
- REcombination BARcode detector.☆16Apr 2, 2024Updated 2 years ago
- Reduced order modeling with shallow recurrent decoder networks☆25Jan 20, 2026Updated 3 months ago
- BERT is a dataset that presents vibration tests performed on an aluminum beam with a bolted joint with various tightening torques and hys…☆16Apr 13, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆13Aug 11, 2022Updated 3 years ago
- Interface between R and the OpenStreetMap-based routing service Valhalla☆25Feb 18, 2026Updated 2 months ago
- ☆13May 27, 2025Updated 11 months ago
- Course on nowcasting and forecasting of infectious disease dynamics☆23May 1, 2026Updated last week
- Continuous Spatiotemporal Transformer☆23May 30, 2023Updated 2 years ago
- ☆33Jan 4, 2020Updated 6 years ago
- epidemia package☆49Jun 24, 2022Updated 3 years ago
- ODE modelling in Python☆30Apr 29, 2026Updated last week
- ☆22Apr 22, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Welcome to the StrainHub Repo - Files and Data - StrainHub Online:☆18Jun 26, 2022Updated 3 years ago
- ☆44Apr 13, 2026Updated 3 weeks ago
- Official repo to paper☆12Jan 15, 2023Updated 3 years ago
- Epidemiology modelling framework for the Thanzi la Onse project☆34Updated this week
- Course materials of "Bayesian Modelling and Probabilistic Programming with Numpyro, and Deep Generative Surrogates for Epidemiology"☆71Feb 25, 2025Updated last year
- Official code implementation for the ACL 2024 Student Research Workshop paper "In-Context Symbolic Regression: Leveraging Large Language …☆18Sep 26, 2024Updated last year
- ☆20Oct 26, 2023Updated 2 years ago
- Advanced R 1-day course taught at the University of Cambridge☆11Jul 6, 2018Updated 7 years ago
- Data and R code to support Lowe et al., (2021). Combined effects of hydrometeorological hazards and urbanisation on dengue risk in Brazil…☆27Feb 13, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- STONEHENGE is an ensemble of open source Matlab and C++ codes for nonlinear dynamic analysis of vibration energy harvesting systems.☆21Apr 7, 2026Updated last month
- Training Language Model Agents to Find Vulnerabilities with CTF-Dojo☆45Jan 10, 2026Updated 4 months ago
- ☆10Sep 30, 2025Updated 7 months ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Jun 14, 2022Updated 3 years ago
- ☆11Aug 21, 2018Updated 7 years ago
- Updated rf-src code for forthcoming RF-SLAM package.☆15Oct 9, 2020Updated 5 years ago
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.☆10Dec 20, 2021Updated 4 years ago