Alternatives and similar repositories for epydemix

Users that are interested in epydemix are comparing it to the libraries listed below

• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆46Updated 2 years ago
• jg-you / noisy-networks-measurements
  Noisy network measurement with stan
  ☆56Updated 4 years ago
• jgarciab / NetworkScience
  Summer School on Network Science (UU)
  ☆22Updated 11 months ago
• amanda-minter / abc_R
  ☆11Updated 4 years ago
• alsnhll / COVID19NetworkSimulations
  Public repository for stochastic network simulations of COVID19 dynamics
  ☆12Updated 4 years ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆37Updated last year
• franksh / EpiCommute
  Simulate an epidemic metapopulation model with mobility-reducing containment strategies
  ☆11Updated 4 years ago
• akira-endo / COVID19_backwardtracing
  Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing
  ☆8Updated 4 years ago
• HopkinsIDD / flepiMoP
  The Flexible Epidemic Modeling Pipeline
  ☆9Updated this week
• network-cards / network-cards
  Concise, readable summaries of network data
  ☆22Updated last year
• pholme / tsir
  Fast code for SIR on temporal networks
  ☆25Updated 3 years ago
• synthpops / synthpops
  Create synthetic populations for COVID-19 epidemic analyses.
  ☆47Updated 4 months ago
• JanaLasser / agent_based_COVID_SEIRX
  ☆12Updated 3 years ago
• cobeylab / Rt_estimation
  Code to test Rt estimates against synthetic data
  ☆18Updated 4 years ago
• mcontisc / CRep
  Probabilistic generative model and efficient algorithm to model reciprocity in directed networks.
  ☆16Updated last year
• gstonge / spreading_CR
  Gillespie algorithm for the simulation of spreading processes on complex networks using a composition and rejection scheme.
  ☆11Updated 3 years ago
• latentnetworks / vimure
  Variational Inference for Multiply-Reported social network data https://doi.org/10.1093/jrsssa/qnac004
  ☆12Updated last year
• lmbett / Introduction-to-Urban-Science-Course-Materials
  This contains slides, code, data and reading materials for the the course.
  ☆77Updated 5 months ago
• cclaualc / nullnest
  Constructing a null model and measuring the nestedness of bipartite networks
  ☆12Updated 4 years ago
• emoro / walking_COVID19
  Code and data to reproduce the figures of "Effect of COVID-19 response policies on walking behavior in US cities"
  ☆11Updated 4 years ago
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆18Updated 2 weeks ago
• gstonge / SamplableSet
  An efficient implementation of a set which can be randomly sampled according to the weights of the elements.
  ☆23Updated last year
• iaciac / simplagion
  Code associated to the paper 'Simplicial models of social contagion' Nat. Commun. (2019)
  ☆46Updated 3 years ago
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated 3 months ago
• Jasminapg / Covid-19-Analysis
  Mathematical modelling of different strategies to reopen schools in the UK post COVID-19
  ☆14Updated 3 years ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 3 weeks ago
• biouea / covidhm
  ☆23Updated 4 years ago
• mitmedialab / DeepABM-Pandemic
  ☆8Updated last year
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• NERDSITU / gdstutorial
  Geospatial Data Science Tutorial for IC2S2'23
  ☆26Updated last year