The CAVER PyMOL plugin enables calculation and visualization of tunnels in PyMOL using Caver 3.02 software.
☆10Oct 18, 2019Updated 7 years ago
Alternatives and similar repositories for caver-pymol-plugin
Users that are interested in caver-pymol-plugin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rosetta Funclib☆25May 9, 2020Updated 6 years ago
- Program for INTEGRATE guide RNA generation and off-target evaluation☆11Feb 13, 2023Updated 3 years ago
- One-click use of AlphaFold☆12Jun 20, 2023Updated 3 years ago
- The gmx_rrcs script is designed to calculate the residues-residues contact scores (rrcs) from a trajectory file generated by GROMACS.☆19Jun 16, 2025Updated last year
- A PyMOL Plugin for calculating docking box for LeDock, AutoDock and AutoDock Vina.☆129Jun 6, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PiViewer: an open-source tool for automated detection and display of pi-pi interactions☆14Jun 6, 2018Updated 8 years ago
- ☆12Jan 2, 2021Updated 5 years ago
- code and source data for de novo design of Kemp elimination paper☆27Sep 18, 2025Updated last year
- Protocols and tools to run (automated) atomistic simulations of enzyme-ligand systems☆21Oct 11, 2021Updated 5 years ago
- Python package for site-directed spin labeling of proteins☆15Jun 9, 2026Updated 4 months ago
- Toolkit for automated phenotyping of biodiversity images using image analysis and ML.☆10Jul 17, 2025Updated last year
- ☆14Mar 28, 2025Updated last year
- ☆40Jun 20, 2022Updated 4 years ago
- Principal Interacting Orbital analysis for python 3☆10Oct 29, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆26Aug 1, 2023Updated 3 years ago
- Supporting Information for "Prediction of Organic Compound Aqueous Solubility Using Interpretable Machine Learning"☆13Jun 5, 2023Updated 3 years ago
- Python package for data analysis for dipolar EPR spectroscopy☆22May 31, 2026Updated 5 months ago
- ☆11Oct 8, 2024Updated 2 years ago
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆43Aug 17, 2026Updated 2 months ago
- A public repository with scripts and tools for cloning and setting up RosettaCommons repositories.☆27Mar 8, 2024Updated 2 years ago
- ☆23Dec 20, 2024Updated last year
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆37Feb 1, 2026Updated 9 months ago
- Molecular dynamics simulation skills for AI agents☆17Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MCP server for life-science knowledge graphs☆20Updated this week
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- A VMD script to calculate side-chain and backbone dihedrals (torsion angles)☆14Jun 4, 2016Updated 10 years ago
- my crystallographic toolbox☆18Sep 2, 2026Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆89Oct 24, 2025Updated last year
- An accurate and efficient protein sequence design approach☆27Mar 16, 2025Updated last year
- DeepSiteForOpenAI 是一个灵活的开发工具，它将 DeepSite 的强大功能与 OpenAI 接口无缝集成，支持自定义接口，使用openai 风格的接口为开发者提供了一个高效、智能的编程环境。这个工具允许用户通过自然语言描述来生成代码，实现"氛围编程"（Vi…☆15Apr 9, 2025Updated last year
- Python library to run structure based model (SBM) simulations using the OpenMM toolkit☆25Jan 16, 2026Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆96Jul 31, 2026Updated 3 months ago
- ☆34Feb 5, 2025Updated last year
- ☆11Mar 31, 2026Updated 7 months ago
- ☆29Dec 2, 2024Updated last year
- ☆20Jun 21, 2025Updated last year
- A generalized enzyme kinetics parameter prediction model.☆98Oct 2, 2025Updated last year
- Generating dynamic structures through physics-based sampling of trRosettaX2-predicted inter-residue geometries☆11Mar 17, 2026Updated 7 months ago