Alternatives and similar repositories for GetBox-PyMOL-Plugin

Users that are interested in GetBox-PyMOL-Plugin are comparing it to the libraries listed below

• Wang-Lin-boop / CADD-Scripts
  Scripts for virtual screening, cross docking and protein relax using Schrödinegr and Rosetta
  ☆76Updated 3 months ago
• CharlesHahn / DuIvyTools
  A Tool to process and visualize the results of molecular dynamics simulations(GROMACS).
  ☆77Updated 10 months ago
• beikwx / SailVina
  SailVina重构增强版
  ☆91Updated last year
• DeltaGroupNJUPT / Vina-GPU-2.0
  Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.
  ☆106Updated last year
• abeebyekeen / CHAPERONg
  CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses
  ☆49Updated 6 months ago
• DweipayanG / GROMACS-Protein-Ligand
  ☆50Updated 2 years ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆171Updated this week
• DeltaGroupNJUPT / Vina-GPU-2.1
  Vina-GPU 2.1, an improved docking toolkit for faster speed and higher accuracy on the virtual screening
  ☆105Updated 9 months ago
• Valdes-Tresanco-MS / AutoDockTools_py3
  Python3 translation of AutoDockTools
  ☆122Updated last year
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆70Updated 3 months ago
• paiardin / DockingPie
  A Consensus Docking Plugin for PyMOL
  ☆74Updated last year
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆67Updated last month
• Kortemme-Lab / flex_ddG_tutorial
  ☆117Updated 2 years ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆138Updated 3 months ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆105Updated 11 months ago
• QVina / qvina
  Accurately speed up AutoDock Vina
  ☆152Updated last year
• guyujun / pyrosetta-basic
  ☆167Updated 3 years ago
• Valdes-Tresanco-MS / AMDock-win
  (Windows) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina
  ☆67Updated 2 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆113Updated last year
• ccsb-scripps / ADCP
  AutoDock CrankPep for peptide and disordered protein docking
  ☆51Updated 4 years ago
• Valdes-Tresanco-MS / AMDock
  (Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina
  ☆69Updated last year
• MolecularAI / DockStream
  DockStream: A Docking Wrapper to Enhance De Novo Molecular Design
  ☆122Updated 2 years ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆53Updated 10 months ago
• ChatMol / gromacs_copilot
  Let LLM run your MDs.
  ☆215Updated 3 months ago
• jamesgleave / DD_protocol
  Official repository for the Deep Docking protocol
  ☆121Updated last year
• CharlesHahn / DuIvy
  some scripts for analysis of MD and CADD. And some tutorials.
  ☆57Updated 11 months ago
• MooersLab / pymolshortcuts
  The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…
  ☆79Updated last year
• PKUGaoGroup / DSDP
  Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, …
  ☆59Updated 2 weeks ago
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆105Updated 10 months ago
• liyigerry / gmx
  molecular dynamics simulation and analysis. 分子动力学模拟和分析。
  ☆40Updated 5 years ago