repository associated to our pipeline for lipid dynamics
☆15Jun 17, 2024Updated last year
Alternatives and similar repositories for LipidDyn
Users that are interested in LipidDyn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Martini 3 Building Blocks for Lipid Nanoparticle Design☆22Updated this week
- the MAVISp database for annotations and predictions of variant effects at the protein level☆13Mar 17, 2026Updated last week
- ☆10Oct 31, 2025Updated 4 months ago
- A deep learning-based framework to uniquely identify an uncorrelated, isometric and meaningful latent representation.☆20Sep 12, 2023Updated 2 years ago
- This reposatory includes all scripts necessary to calculate the GRAil-based DEscriptor (GRADE) and the eXtended GRAil-based DEscriptor (X…☆13Jan 23, 2025Updated last year
- ☆12Mar 21, 2021Updated 5 years ago
- TS2CG version 2☆26Feb 28, 2026Updated 3 weeks ago
- A molecule generative model used interaction fingerprint (docking pose) as constraints.☆15Feb 13, 2022Updated 4 years ago
- Clustering tool for biomolecular structural ensembles and data in general.☆10Aug 24, 2020Updated 5 years ago
- ☆17May 15, 2024Updated last year
- Read SACD ISO files list & extract tracks using sacd_extract☆12Jul 8, 2018Updated 7 years ago
- This is the official implementation of the paper "A Deep Learning Approach for Rational Ligand Generation with Property Control via React…☆20Sep 28, 2024Updated last year
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆19Oct 25, 2020Updated 5 years ago
- A tool for the analysis of pathways sampled in molecular dynamics simulations based on Self-Organizing Maps (SOM)☆10Jan 26, 2022Updated 4 years ago
- A versatile and interactive package for solving crystal structures from powder diffraction data☆13Dec 16, 2025Updated 3 months ago
- Density based object completion over PBC.☆30Dec 10, 2024Updated last year
- Enhanced sampling methods for molecular dynamics simulations☆43Dec 16, 2022Updated 3 years ago
- ☆14Jun 4, 2024Updated last year
- Algorithm for identifying hydrogen bond networks in CG proteins to implement Go-like Martini 3 models☆16Oct 25, 2024Updated last year
- development repository for PyInteraph2☆22Updated this week
- ☆70Jul 19, 2023Updated 2 years ago
- Coarse-grained mapping and parametrisation for the Martini 3 forcefield☆23Aug 5, 2025Updated 7 months ago
- Home of the Martini 3 Sterol Parameters☆13Oct 10, 2023Updated 2 years ago
- ☆13May 9, 2025Updated 10 months ago
- ☆29May 8, 2024Updated last year
- ☆14Jul 5, 2022Updated 3 years ago
- A complete waste of time☆15Dec 11, 2022Updated 3 years ago
- ☆12Jul 5, 2024Updated last year
- TS-DAR identifies transition states of protein conformational changes from MD simulations using hyperspherical embeddings in the latent s…☆18Oct 27, 2025Updated 4 months ago
- COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3☆45Nov 25, 2025Updated 3 months ago
- Flexibility-conditioned protein structure design☆32Mar 10, 2026Updated 2 weeks ago
- ☆15Oct 9, 2025Updated 5 months ago
- Assorted Python Scripts to accompany the gmx analysis tools☆12Jul 16, 2019Updated 6 years ago
- Copernicus☆18Oct 27, 2017Updated 8 years ago
- Conversion of coarsegrain to atomistic (complete rewrite of the original CG2AT)☆33Jul 17, 2024Updated last year
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆16Jul 30, 2023Updated 2 years ago
- Generates and scores synthetically tractable elaborations from fragment screens☆21Feb 27, 2026Updated 3 weeks ago
- The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…☆11Mar 12, 2026Updated last week
- ☆48Mar 5, 2026Updated 2 weeks ago