lassoan / SlicerMONAIAuto3DSegLinks
Extension for 3D Slicer for running MONAI Auto3DSeg models
☆97Updated 3 months ago
Alternatives and similar repositories for SlicerMONAIAuto3DSeg
Users that are interested in SlicerMONAIAuto3DSeg are comparing it to the libraries listed below
Sorting:
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆97Updated 2 weeks ago
- 3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.☆48Updated 3 months ago
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆270Updated last week
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆110Updated 9 months ago
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆227Updated last week
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆137Updated 3 months ago
- ☆139Updated last month
- Website for NA-MIC Project Weeks☆92Updated last week
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated last year
- 3D Slicer extension for cardiac analysis☆145Updated last week
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆31Updated last year
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆279Updated last month
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆83Updated last year
- ☆114Updated this week
- Collection of utilities that are not polished implementations but can be useful to users☆89Updated 2 weeks ago
- Implementation of the DeepVesselNet deep learning network☆152Updated 2 years ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆73Updated last week
- Computed tomography to body composition (Comp2Comp).☆94Updated 3 weeks ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆51Updated 2 months ago
- DICOM RT-Struct to mask☆101Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆78Updated last year
- Materials for the yearly PerkLab bootcamp course☆95Updated 2 months ago
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆51Updated last week
- nii2dcm: NIfTI to DICOM creation with Python☆79Updated 5 months ago
- This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.☆35Updated 3 months ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆72Updated 4 years ago
- 3D Slicer Plugin for Segment anything in medical images☆256Updated 6 months ago
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆103Updated 6 months ago
- ☆34Updated last month
- ☆111Updated last week