UMEssen / SALTLinks
Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.
☆81Updated last year
Alternatives and similar repositories for SALT
Users that are interested in SALT are comparing it to the libraries listed below
Sorting:
- ☆139Updated 2 months ago
- Computed tomography to body composition (Comp2Comp).☆95Updated 3 weeks ago
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆63Updated 4 months ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆137Updated 4 months ago
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆31Updated last year
- Sparsely Annotated Region and Organ Segmentation (SAROS) - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imag…☆56Updated 8 months ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆110Updated 9 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆50Updated 2 months ago
- Precision medicine toolbox☆70Updated last year
- An AI-powered open-source medical image analysis toolbox☆63Updated last year
- ☆76Updated last month
- ☆94Updated last month
- ☆34Updated 2 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆96Updated 3 weeks ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆72Updated 4 years ago
- Python package for DICOM-SEG medical segmentation file reading and writing☆85Updated 2 years ago
- MRISegmentator☆44Updated last month
- Website for NA-MIC Project Weeks☆92Updated 2 weeks ago
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆103Updated 6 months ago
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆270Updated last week
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆98Updated this week
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆78Updated last year
- MONAI Versatile Imaging Segmentation and Annotation☆235Updated this week
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆43Updated 2 months ago
- MONAIViz - 3D Slicer Extension☆24Updated this week
- Deep learning multi modality automated organ segmentation tools☆15Updated 8 months ago
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆51Updated last week
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆51Updated 2 months ago
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆83Updated 2 months ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆91Updated 2 weeks ago