Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model
☆245Mar 18, 2026Updated last week
Alternatives and similar repositories for SlicerTotalSegmentator
Users that are interested in SlicerTotalSegmentator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for robust segmentation of >100 important anatomical structures in CT and MR images☆2,548Mar 20, 2026Updated last week
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆117Mar 19, 2026Updated last week
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆314Mar 4, 2026Updated 3 weeks ago
- 3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.☆56Jun 24, 2025Updated 9 months ago
- Extension for 3D Slicer that allows the application to be used from Jupyter notebook☆261Aug 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Convert the TotalSegmentator dataset into the nnUNet format☆19Aug 1, 2023Updated 2 years ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆130Jan 23, 2026Updated 2 months ago
- This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.☆37Jun 7, 2025Updated 9 months ago
- 3D Slicer Module for connecting to model repository and use models for image analysis.☆27Oct 5, 2023Updated 2 years ago
- Many additional segmentation tools for 3D Slicer's Segment Editor☆49Mar 17, 2026Updated last week
- docker config files for slicer☆23Jul 3, 2023Updated 2 years ago
- ☆398Jun 23, 2025Updated 9 months ago
- MONAI Label is an intelligent open source image labeling and learning tool.☆821Mar 20, 2026Updated last week
- Multi-platform, free open source software for visualization and image computing.☆2,379Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Template to be used as a starting point for creating a custom 3D Slicer application☆67Jan 23, 2026Updated 2 months ago
- Collection of utilities that are not polished implementations but can be useful to users☆95Feb 14, 2026Updated last month
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆44Jan 15, 2026Updated 2 months ago
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆115Mar 12, 2026Updated 2 weeks ago
- Slicer extension for TOMAAT☆17Jun 18, 2024Updated last year
- Materials for the yearly PerkLab bootcamp course☆97Jul 29, 2025Updated 7 months ago
- The official implementation of "Enhancing Representation in Radiography-Reports Foundation Model: A Granular Alignment Algorithm Using Ma…☆13Sep 13, 2024Updated last year
- CLI module for airway segmentation starting from chest CT images☆13Jun 17, 2024Updated last year
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Jan 26, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆8,159Mar 20, 2026Updated last week
- ☆157Mar 18, 2026Updated last week
- A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.☆253Jul 20, 2025Updated 8 months ago
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆33Feb 13, 2024Updated 2 years ago
- A 3D Slicer integration to Meta's SAM.☆249Mar 30, 2024Updated last year
- 3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab☆14Feb 25, 2026Updated last month
- Website for NA-MIC Project Weeks☆92Mar 4, 2026Updated 3 weeks ago
- ☆15Feb 12, 2025Updated last year
- A multilabel lymph node segmentation dataset from contrast CT☆27Jul 29, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Example Application for Slicer Customization - Generated from KitwareMedical/SlicerCustomAppTemplate☆15Mar 9, 2023Updated 3 years ago
- MONAI Versatile Imaging Segmentation and Annotation☆267Jan 18, 2026Updated 2 months ago
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆299Nov 24, 2025Updated 4 months ago
- Stores the MHub models dockerfiles and scripts.☆11Jan 28, 2026Updated last month
- 3D Slicer extension for accessing HD-BET brain extraction tool for skull stripping in brain MRI images.☆26Jan 20, 2025Updated last year
- ☆42Jul 27, 2023Updated 2 years ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆88Jan 29, 2026Updated last month