MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemic TB whole-person research.The pipeline is based on nn-UNet and has the capability to segment 120 unique tissue classes from a whole-body 18F-FDG PET/CT image.
☆336Jul 14, 2026Updated 2 weeks ago
Alternatives and similar repositories for MOOSE
Users that are interested in MOOSE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool to multiplex different tracer PET data from the same patient.☆21Jul 3, 2026Updated 3 weeks ago
- LION: Lesion Segmentation. Simplified.☆22May 28, 2026Updated 2 months ago
- FALCON is a Python-based software application designed to facilitate PET motion correction, both for head and total-body scans. Our pro…☆55Mar 26, 2026Updated 4 months ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆75Jul 9, 2026Updated 2 weeks ago
- Tool for robust segmentation of >100 important anatomical structures in CT and MR images☆2,903Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Welcome to Nifti2Dicom! Born from countless hours of yelling at screens, this software aims to swap NIfTI for DICOM without inviting any …☆27Mar 5, 2026Updated 4 months ago
- A 3D lesion segmentation method on whole-body PET images including automated quality control.☆13Jun 20, 2024Updated 2 years ago
- This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…☆26Mar 6, 2025Updated last year
- Deep learning multi modality automated organ segmentation tools☆17Jan 22, 2025Updated last year
- ☆160Jul 6, 2026Updated 3 weeks ago
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆268Jul 21, 2026Updated last week
- This data-centric AI repository implements a robust deep learning method (LFBNet) for fully automated tumor segmentation in whole-body [1…☆41Dec 12, 2025Updated 7 months ago
- [ICLR 2024 oral; top 1.2%] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)☆427Jul 9, 2026Updated 2 weeks ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆151May 20, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 🩻 Whole-body CT segmentation made simple: 22,022 scans, 167 structures, one open solution.☆82Updated this week
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆123Apr 18, 2026Updated 3 months ago
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆82Jan 26, 2026Updated 6 months ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆228May 4, 2026Updated 2 months ago
- High-level DICOM abstractions for the Python programming language☆235Updated this week
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆460Jul 10, 2026Updated 2 weeks ago
- Computed tomography to body composition (Comp2Comp).☆123Jan 6, 2026Updated 6 months ago
- ☆26Oct 29, 2024Updated last year
- Individual Coefficient Approximation for Risk Estimation (ICARE) model☆18Sep 9, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- [Nature 2026] Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured …☆454May 23, 2026Updated 2 months ago
- ☆161Updated this week
- Contrast-agnostic segmentation of MRI scans☆565Jul 17, 2024Updated 2 years ago
- Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comp…☆269Updated this week
- Interactive AI agentic framework for PET imaging that explores multimodal images, quantification, and AI-tool based end-to-end analyses