KitwareMedical / SlicerNNUnetLinks
3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.
☆34Updated 4 months ago
Alternatives and similar repositories for SlicerNNUnet
Users that are interested in SlicerNNUnet are comparing it to the libraries listed below
Sorting:
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆87Updated 3 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆66Updated last week
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆172Updated 3 weeks ago
- ☆126Updated last month
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆238Updated this week
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆86Updated 5 months ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆127Updated last week
- ☆105Updated 3 weeks ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆132Updated last month
- DICOM RT-Struct to mask☆101Updated last year
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆170Updated last week
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆94Updated 2 months ago
- Knee MRI cartilage segmentation model used in 2019 IWOAI segmentation challenge☆17Updated 3 years ago
- The supplementary code for the pulmonary artery-vein segmentation with various inter-slice thickness☆27Updated 2 months ago
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆59Updated this week
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆79Updated 8 months ago
- ☆50Updated 4 months ago
- ☆110Updated 4 months ago
- Medical Image Radiomics Processor☆68Updated 3 weeks ago
- A package to compute medical segmentation metrics.☆162Updated 10 months ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆67Updated 4 years ago
- This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…☆20Updated 2 months ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆57Updated last week
- Extension for 3D Slicer containing various tools for module development and debugging☆30Updated 6 months ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆53Updated 2 months ago
- MONAI Versatile Imaging Segmentation and Annotation☆193Updated 3 weeks ago
- Collection of utilities that are not polished implementations but can be useful to users☆84Updated 7 months ago
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆218Updated 2 months ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆51Updated 2 months ago
- MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.☆46Updated 3 weeks ago