hhaentze / MRSegmentator
☆118Updated last month
Alternatives and similar repositories for MRSegmentator:
Users that are interested in MRSegmentator are comparing it to the libraries listed below
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆78Updated 5 months ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆76Updated 3 months ago
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆56Updated 6 months ago
- MONAI Versatile Imaging Segmentation and Annotation☆164Updated this week
- MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.☆40Updated last week
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆103Updated 2 weeks ago
- Computed tomography to body composition (Comp2Comp).☆71Updated 2 months ago
- Baseline AI models for 3D csPCa detection/diagnosis in bpMRI☆45Updated last month
- Sparsely Annotated Region and Organ Segmentation (SAROS) - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imag…☆46Updated 2 months ago
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆230Updated this week
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆81Updated last month
- 3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.☆31Updated 2 months ago
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆80Updated 2 weeks ago
- [NeurIPS 2024] Touchstone - Benchmarking AI on 5,172 o.o.d. CT volumes and 9 anatomical structures☆111Updated last month
- ☆118Updated last year
- Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology repo…☆60Updated 2 weeks ago
- SAM-Med3D: An Efficient 3D Model for Promptable Volumetric Medical Image Segmentation☆28Updated last year
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆86Updated 5 months ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆124Updated this week
- Annotations for the PI-CAI Challenge: Public Training and Development Dataset☆57Updated 6 months ago
- Streamline deep learning experiments using config files☆44Updated this week
- A package to compute medical segmentation metrics.☆155Updated 8 months ago
- The official repository for "One Model to Rule them All: Towards Universal Segmentation for Medical Images with Text Prompts"☆181Updated last month
- ☆147Updated 6 months ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆108Updated last week
- DICOM RT-Struct to mask☆101Updated last year
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆24Updated last year
- AeroPath: An airway segmentation benchmark dataset with challenging pathology☆35Updated 9 months ago
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆255Updated last month