kirbyju / TCIA_NotebooksLinks
Notebooks for working with The Cancer Imaging Archive datasets. Have you written one? Submit a PR!
☆117Updated last month
Alternatives and similar repositories for TCIA_Notebooks
Users that are interested in TCIA_Notebooks are comparing it to the libraries listed below
Sorting:
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆111Updated 3 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆134Updated last year
- Precision medicine toolbox☆70Updated last year
- Medical Image Radiomics Processor☆68Updated this week
- A package to simplify common tasks one might perform when interacting with The Cancer Imaging Archive (TCIA) via Python.☆20Updated 5 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆47Updated last week
- Data, notebooks, and articles associated with the RSNA AI Deep Learning Lab at RSNA 2021☆82Updated 3 years ago
- Computed tomography to body composition (Comp2Comp).☆86Updated last month
- Pretrained model for self supervised histopathology☆118Updated 3 years ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆86Updated 9 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 3 years ago
- Materials for the 2021 MONAI Bootcamp☆109Updated 3 years ago
- ☆65Updated last year
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆69Updated 4 years ago
- A Girder plugin for pathology image annotations and analysis.☆72Updated last week
- An open-source digital pathology based rapid image annotation tool☆78Updated last week
- Workflow for Optimal Radiomics Classification☆75Updated 2 weeks ago
- MONAI Versatile Imaging Segmentation and Annotation☆204Updated last month
- ☆86Updated 3 weeks ago
- Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: h…☆190Updated last year
- Self-guided notebook tutorials to help get started with IDC☆35Updated last month
- Some code for processing and analysing UK Biobank cardiac MR images.☆172Updated 7 months ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆39Updated last week
- AI-based molecular classification of diffuse gliomas using rapid, label-free optical imaging☆32Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated last year
- ☆129Updated 2 months ago
- ☆176Updated 4 months ago
- ☆62Updated 9 months ago
- ☆31Updated last year
- ☆47Updated last year