Example scripts demonstrating science at the command line.
☆74Feb 15, 2021Updated 5 years ago
Alternatives and similar repositories for nature_bash
Users that are interested in nature_bash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lab best practices and policies to conduct open, reproducible, and inspiring science that is efficient and fun☆12Sep 26, 2025Updated 7 months ago
- Course materials for "Intro to Environmental Data Science" offered during Winter 2020 in the UW School of Aquatic and Fishery Sciences☆12Jan 16, 2020Updated 6 years ago
- View the slides here: https://rawgit.com/benmarwick/CSSCR-2018-R-Markdown-for-Research-Students/master/uw-csscr-huskydown-slides.html☆16Apr 4, 2018Updated 8 years ago
- Some ideas on making Bags into Git repositories☆16Dec 23, 2014Updated 11 years ago
- Build a map of genes present across a set of microbial genomes☆18Jan 23, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆13Mar 31, 2022Updated 4 years ago
- Fast, easy-to-use intracranial electrode localization software built entirely in MATLAB☆26Updated this week
- Chromatin States Map in mouse embryonic stem cell☆19Apr 11, 2018Updated 8 years ago
- k-mer similarity analysis pipeline☆22Nov 20, 2025Updated 5 months ago
- Workshop materials for cBioPortal Webinar 5: API & R Client☆19May 28, 2020Updated 5 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆30Sep 9, 2021Updated 4 years ago
- University of Cambridge PhD thesis☆16Jan 8, 2021Updated 5 years ago
- EOPF 101 introduces you to tools and practical examples working with Sentinel Zarr data created by the ESA EOPF Sample Service.☆39Updated this week
- Formatting extension for Quarto☆13Sep 22, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not…☆28Dec 31, 2023Updated 2 years ago
- ☆12Mar 18, 2026Updated last month
- Escrevendo manuscritos acadêmicos usando rmarkdown. LatinR 2020☆16Dec 4, 2020Updated 5 years ago
- Helper functions to work with spreadsheets and the "A1:D10" style of cell range specification☆51Feb 17, 2023Updated 3 years ago
- R package | May All Data be Reproducible and Transparent (MADRaT)☆17Mar 31, 2026Updated last month
- Repo for Proksee Cmd Line Tools☆29Feb 22, 2023Updated 3 years ago
- ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications☆28Dec 12, 2023Updated 2 years ago
- phylogenetic networks using ggplot2 and ggtree☆11Oct 22, 2025Updated 6 months ago
- Content will be open and available for use by our user communities, and will be used to help foster open science practices with our exter…☆12Nov 2, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Spring 2021 Short Course materials☆12Dec 2, 2024Updated last year
- ☆11Jun 13, 2024Updated last year
- Various tools & templates for manuscript preparation (Illustrator and InDesign)☆16May 10, 2019Updated 6 years ago
- ARCHIVED Share R Code on Twitter☆35May 10, 2022Updated 3 years ago
- scikit-procrustes, a collection of solvers for the (Weighted) Orthogonal Procrustes Problem☆11Apr 3, 2019Updated 7 years ago
- Answers to some "weird" statistics questions with R code☆10Jun 8, 2025Updated 10 months ago
- ☆22Oct 27, 2020Updated 5 years ago
- BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data☆10Jun 13, 2023Updated 2 years ago
- examples of using slurm in life sciences workflows using posix file systems and object storage☆40May 29, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Computing resources for peace of mind☆13Feb 23, 2023Updated 3 years ago
- ☆10Mar 15, 2023Updated 3 years ago
- An exploration of how to use inter-subject representational similarity analysis (is-RSA) to study individual differences in brain activit…☆20Apr 22, 2020Updated 6 years ago
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- The stack I use to make reproducible reports of my statistical analyses☆21Jan 18, 2018Updated 8 years ago
- Code from Applied Hierarchical Modeling in Ecology translated to NIMBLE (from JAGS/WinBUGS)☆13Mar 9, 2022Updated 4 years ago
- Github pages based template for hackathons☆13Apr 20, 2026Updated last week