JunMa11 / ML-SRT
Machine learning methods for spatially resolved transcriptomics with histology images: a collection of related resources.
☆10Updated 3 years ago
Alternatives and similar repositories for ML-SRT
Users that are interested in ML-SRT are comparing it to the libraries listed below
Sorting:
- ☆16Updated 11 months ago
- Attention Based Deep 3D Multiple Instance Learning☆24Updated 4 years ago
- ☆18Updated last year
- ☆14Updated 6 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆23Updated 3 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆33Updated last year
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆15Updated last year
- ☆30Updated 5 years ago
- ☆44Updated 2 years ago
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆22Updated last year
- Code for the DRA-Net☆7Updated 3 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- ☆29Updated 3 years ago
- ☆11Updated 2 years ago
- Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…☆20Updated 4 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆24Updated 2 years ago
- Code for our MICCAI 2021 paper "AMINN: Autoencoder-based Multiple Instance Neural Network Improves Outcome Prediction of Multifocal Liver…☆10Updated 3 years ago
- ☆14Updated 4 years ago
- MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"☆38Updated 4 years ago
- Instance-based Vision Transformer for Subtyping of Papillary Renal Cell Carcinoma in Histopathological Image-MICCAI 2021☆17Updated last year
- Survival Convolutional Neural Networks☆68Updated 2 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Updated 4 years ago
- Code from Foersch et al. (Under Construction / Development)☆36Updated last year
- ☆15Updated 5 years ago
- Late AMD progression classification using fundus images and genotypes☆23Updated last year
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …☆25Updated 4 years ago
- A manually annotated test set for DeepLesion with 3D lesion boxes☆25Updated 4 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated 2 years ago
- This is the pytorch\DGL implementation of the AMIGO paper.☆10Updated last year