JunMa11 / ML-SRTLinks
Machine learning methods for spatially resolved transcriptomics with histology images: a collection of related resources.
☆10Updated 3 years ago
Alternatives and similar repositories for ML-SRT
Users that are interested in ML-SRT are comparing it to the libraries listed below
Sorting:
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆22Updated 3 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆34Updated 2 years ago
- ☆21Updated last year
- Attention Based Deep 3D Multiple Instance Learning☆24Updated 5 years ago
- Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding☆30Updated last year
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated 2 years ago
- ☆16Updated last year
- Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…☆60Updated 3 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Updated 3 years ago
- ☆19Updated 4 years ago
- Divide-and-Rule: Self-Supervised Learning for Survival Analysis in Colorectal Cancer☆23Updated last year
- ☆16Updated 2 years ago
- AttriMIL for Whole-Slide Pathological Image Analysis☆18Updated 3 weeks ago
- ☆16Updated 3 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆34Updated 3 years ago
- ☆71Updated 4 years ago
- ☆32Updated 3 years ago
- Region-guided CycleGANs for stain transfer☆19Updated 2 years ago
- Code for our MICCAI 2021 paper "AMINN: Autoencoder-based Multiple Instance Neural Network Improves Outcome Prediction of Multifocal Liver…☆10Updated 4 years ago
- The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …☆25Updated 4 years ago
- Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"☆18Updated last year
- Code for replicating results presented in the paper: "Quantifying Explainers of Graph Neural Networks in Computational Pathology"☆45Updated 4 years ago
- ☆15Updated 5 years ago
- ☆18Updated 4 years ago
- ☆20Updated 2 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Updated 5 years ago
- Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)☆28Updated 3 years ago
- Suspicious Regions-Based Whole Slide Image Analysis☆10Updated 3 years ago
- ☆27Updated 4 years ago
- Toolbox for measuring adversarial robustness to many transforms☆19Updated 7 months ago