JunMa11 / ML-SRTLinks
Machine learning methods for spatially resolved transcriptomics with histology images: a collection of related resources.
☆10Updated 3 years ago
Alternatives and similar repositories for ML-SRT
Users that are interested in ML-SRT are comparing it to the libraries listed below
Sorting:
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆23Updated 3 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆34Updated 2 years ago
- ☆19Updated last year
- ☆15Updated 5 years ago
- ☆16Updated last year
- Attention Based Deep 3D Multiple Instance Learning☆24Updated 5 years ago
- ☆18Updated 4 years ago
- ☆17Updated 2 years ago
- ☆18Updated 4 years ago
- ☆45Updated 2 years ago
- Code for our MICCAI 2021 paper "AMINN: Autoencoder-based Multiple Instance Neural Network Improves Outcome Prediction of Multifocal Liver…☆10Updated 3 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Updated 5 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated 2 years ago
- Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726☆25Updated 3 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Updated 2 years ago
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆16Updated 2 years ago
- ☆20Updated 2 years ago
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆22Updated last year
- Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…☆62Updated 3 years ago
- ☆11Updated 3 years ago
- ☆14Updated 6 years ago
- AttriMIL for Whole-Slide Pathological Image Analysis☆16Updated 7 months ago
- The source code of 'Diagnose Like A Pathologist: Weakly-Supervised Pathologist-Tree Network for Slide-Level Immunohistochemical Scoring' …☆24Updated 4 years ago
- Preprocessing module for large histological images☆20Updated 2 years ago
- Learning domain-agnostic visual representation for computational pathology using medically-irrelevant style transfer augmentation☆26Updated 4 years ago
- ☆35Updated 2 years ago
- Suspicious Regions-Based Whole Slide Image Analysis☆10Updated 2 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆40Updated 2 years ago
- Divide-and-Rule: Self-Supervised Learning for Survival Analysis in Colorectal Cancer☆24Updated last year
- Region-guided CycleGANs for stain transfer☆19Updated 2 years ago