Alternatives and similar repositories for imagej2

Users that are interested in imagej2 are comparing it to the libraries listed below

• imagej / ImageJ
  Public domain software for processing and analyzing scientific images
  ☆694Updated 3 weeks ago
• fiji / fiji
  A "batteries-included" distribution of ImageJ
  ☆880Updated 2 weeks ago
• imagej / tutorials
  ImageJ2 programming examples
  ☆192Updated 2 years ago
• imagej / ImageJA
  [OBSOLETE] Please use https://github.com/imagej/ImageJ instead.
  ☆77Updated 3 years ago
• imglib / imglib2
  A generic next-generation Java library for image processing
  ☆312Updated last month
• ome / bioformats
  Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…
  ☆406Updated last week
• micro-manager / micro-manager
  Microscope control and image acquisition integrated with ImageJ
  ☆287Updated this week
• imagej / pyimagej
  Use ImageJ from Python
  ☆521Updated this week
• imagej / imagej-ops
  ImageJ Ops: "Write once, run anywhere" image processing
  ☆90Updated last year
• scifio / scifio
  SCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so d…
  ☆95Updated last year
• scijava / pom-scijava
  Friendly base POM for all SciJava-based software
  ☆28Updated this week
• CellProfiler / CellProfiler
  An open-source application for biological image analysis
  ☆1,055Updated this week
• imagej / example-legacy-plugin
  Simple Maven project for an ImageJ 1.x plugin
  ☆34Updated 3 years ago
• fiji / Stitching
  Fiji's Stitching plugins reconstruct big images from tiled input images.
  ☆109Updated 9 months ago
• joheras / IJ-OpenCV
  ☆30Updated 4 years ago
• ome / openmicroscopy
  OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological …
  ☆214Updated last month
• ijpb / MorphoLibJ
  Collection of mathematical morphology methods and plugins for ImageJ
  ☆110Updated last week
• ilastik / ilastik
  ilastik-shell, applets, and workflows to string them together.
  ☆384Updated last week
• qupath / qupath
  QuPath - Open-source bioimage analysis for research
  ☆1,230Updated this week
• usnistgov / MIST
  Microscopy Image Stitching Tool
  ☆153Updated 2 months ago
• zitmen / thunderstorm
  ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
  ☆105Updated 7 years ago
• imagej / imagej-server
  A RESTful web server for ImageJ [EXPERIMENTAL]
  ☆39Updated 2 years ago
• trackmate-sc / TrackMate
  TrackMate is your buddy for your everyday tracking.
  ☆215Updated 2 weeks ago
• Image-Py / imagepy
  Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and…
  ☆1,336Updated last year
• cmongis / imagejfx
  ImageJ FX is new user inferface for ImageJ
  ☆27Updated 6 years ago
• deepimagej / deepimagej-plugin
  The ImageJ plugin to run deep-learning models
  ☆98Updated 3 months ago
• fiji / fiji.github.io
  Fiji website
  ☆37Updated 3 months ago
• fiji / Trainable_Segmentation
  Fiji library to perform image segmentation based on the Weka learning schemes
  ☆119Updated last year
• DIPlib / diplib
  Quantitative Image Analysis in C++, MATLAB and Python
  ☆245Updated last week
• trakem2 / TrakEM2
  ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.
  ☆32Updated 3 weeks ago