neuropoly / totalspinesegLinks
Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.
☆69Updated last week
Alternatives and similar repositories for totalspineseg
Users that are interested in totalspineseg are comparing it to the libraries listed below
Sorting:
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆103Updated 8 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆91Updated last week
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆50Updated last month
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆162Updated 2 months ago
- Implementation of the DeepVesselNet deep learning network☆151Updated 2 years ago
- ☆84Updated last month
- Skeleton segmentation in CT images☆25Updated 6 months ago
- Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024☆29Updated 2 months ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 5 months ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆69Updated 10 months ago
- ☆137Updated 2 weeks ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆178Updated 3 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆76Updated last year
- ☆27Updated last year
- Convert the TotalSegmentator dataset into the nnUNet format☆16Updated 2 years ago
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆80Updated last month
- A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.☆103Updated 2 months ago
- XiaoweiXu / ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT☆74Updated last year
- Landmark detection engine for 3D medical images (MICCAI workshop 2021)☆45Updated last month
- Multi-subject data for the Spine Generic project☆28Updated 2 weeks ago
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆94Updated 2 months ago
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆101Updated 5 months ago
- DL-CTA coronary Agatston calcium scoring☆21Updated 4 years ago
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆264Updated last week
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆251Updated last week
- ☆42Updated 2 years ago
- Structure and position aware graph neural network for airway labeling☆15Updated 3 years ago
- highest ranked algorithm of Learn2Reg requires little to no training and runs within seconds☆65Updated 5 months ago
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated 10 months ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆113Updated last year