mazurowski-lab / SegmentAnyBone
SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
☆65Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for SegmentAnyBone
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆77Updated last month
- The official website for uniGradICON: A Foundation Model for Medical Image Registration☆82Updated this week
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆66Updated last month
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆24Updated 9 months ago
- ☆91Updated last week
- Landmark detection engine for 3D medical images (MICCAI workshop 2021)☆37Updated 4 months ago
- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis☆146Updated 5 months ago
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.☆38Updated 2 years ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆155Updated 2 months ago
- XiaoweiXu / ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT☆58Updated last year
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆65Updated last month
- Baseline AI models for 3D csPCa detection/diagnosis in bpMRI☆45Updated 4 months ago
- Config-based framework for organized and reproducible deep learning. MONAI Bundle + PyTorch Lightning.☆22Updated last week
- The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)☆81Updated 8 months ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆56Updated 4 years ago
- Sparsely Annotated Region and Organ Segmentation (SAROS) - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imag…☆34Updated last month
- MONAI Versatile Imaging Segmentation and Annotation☆131Updated last week
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆46Updated 2 months ago
- Medical Image Radiomics Processor☆53Updated 2 months ago
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆61Updated last year
- Annotations for the PI-CAI Challenge: Public Training and Development Dataset☆49Updated 2 months ago
- ☆31Updated last year
- Computed tomography to body composition (Comp2Comp).☆63Updated 4 months ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆62Updated 3 years ago
- A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.☆51Updated 4 months ago
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆69Updated 2 months ago
- Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures☆73Updated 2 weeks ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆47Updated 4 months ago
- Convert the TotalSegmentator dataset into the nnUNet format☆14Updated last year
- NaviAirway: a Bronchiole-sensitive Deep Learning-based Airway Segmentation Pipeline☆46Updated 2 years ago