MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.
☆55Jun 27, 2026Updated last week
Alternatives and similar repositories for MIST
Users that are interested in MIST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 3DSlicer plugin for inpainting lung nodules in 3D chest CT data.☆11Dec 2, 2024Updated last year
- A multilabel lymph node segmentation dataset from contrast CT☆28Jul 29, 2025Updated 11 months ago
- ☆25Oct 29, 2024Updated last year
- MICCAI 2024/2025: nnUNet incorporating additional baselines as SAMed️, Mamba Variants, and MedNeXT to establish a benchmark for segmentat…☆130May 19, 2026Updated last month
- LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.☆108Apr 1, 2026Updated 3 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆57Jul 24, 2025Updated 11 months ago
- MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantification☆22Jan 21, 2025Updated last year
- ☆13Apr 22, 2022Updated 4 years ago
- A 3D lesion segmentation method on whole-body PET images including automated quality control.☆13Jun 20, 2024Updated 2 years ago
- Init with augmentation loss☆19Feb 7, 2023Updated 3 years ago
- ☆18Dec 26, 2022Updated 3 years ago
- 【IEEE TCYB 2025】Towards Reliable Medical Image Segmentation by Modelling Evidential Calibrated Uncertainty☆35Apr 22, 2024Updated 2 years ago
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆15Apr 29, 2024Updated 2 years ago
- Data preprocessing for CCTA☆14May 29, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python package for DICOM-SEG medical segmentation file reading and writing☆85Aug 23, 2023Updated 2 years ago
- Robust multimodal image registration via keypoints☆94Aug 11, 2024Updated last year
- [IEEE TIM 2024] Partition A Medical Image: Extracting Multiple Representative Sub-Regions for Few-shot Medical Image Segmentation☆18Oct 10, 2024Updated last year
- Asan medical center medical image defacer(de-identification)☆14Nov 23, 2020Updated 5 years ago
- hybrid representation learning approach for fully automatic and template-free vessel centerline extraction☆12Jul 17, 2023Updated 2 years ago
- This data-centric AI repository implements a robust deep learning method (LFBNet) for fully automated tumor segmentation in whole-body [1…☆41Dec 12, 2025Updated 6 months ago
- examples of using PyMIC for medical image computing with deep learning☆33Feb 23, 2026Updated 4 months ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆53Jun 4, 2026Updated last month
- [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.☆517Nov 2, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆18Aug 7, 2023Updated 2 years ago
- AdaMSS: Adaptive Multi-Modality Segmentation-to-Survival Learning for Survival Outcome Prediction☆17Jan 1, 2025Updated last year
- This repository provides a 3D implementation of DINOv2 for self-supervised pretraining on volumetric (3D) medical images using Lightly, M…☆55Apr 24, 2026Updated 2 months ago
- Implementation of research paper : "PraNet: Parallel Reverse Attention Network for Polyp Segmentation" in Tensorflow☆24Sep 25, 2021Updated 4 years ago
- The Centerline-Cross Entropy Loss for Vessel-Like Structure Segmentation: Better Topology Consistency Without Sacrificing Accuracy. Paper…☆30Oct 7, 2024Updated last year
- Convert the TotalSegmentator dataset into the nnUNet format☆19Aug 1, 2023Updated 2 years ago
- ☆15Sep 17, 2023Updated 2 years ago
- Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024☆33Jun 12, 2025Updated last year
- Official Repository for the Endoscapes Dataset for Surgical Scene Segmentation, Object Detection, and Critical View of Safety Assessment☆63Sep 17, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Deep 3D Vessel Segmentation based on Cross Transformer Network☆22Aug 10, 2022Updated 3 years ago
- The source code of "Partial Vessels Annotation-based Coronary Artery Segmentation with Self-training and Prototype Learning".☆22Jan 26, 2024Updated 2 years ago
- This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…☆26Mar 6, 2025Updated last year
- This repository contains the code to our Paper: Medical Transformer for Multimodal Survival Prediction in Intensive Care - Integration of…☆21May 15, 2023Updated 3 years ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆75Jun 30, 2026Updated last week
- Automatic segment and generate masks for any 3D medical images using SAM model without prompt☆14May 3, 2023Updated 3 years ago
- CLIMATv2: Clinically-Inspired Multi-Agent Transformers for Disease Trajectory Forecasting from Multimodal Data☆22Nov 1, 2022Updated 3 years ago