Alternatives and similar repositories for ShapeKit

Users that are interested in ShapeKit are comparing it to the libraries listed below

• Luoxd1996 / RAOS
  [MICCAI2024] Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging …
  ☆56Updated last year
• alexanderjaus / AtlasDataset
  ☆46Updated last year
• alibaba-damo-academy / self-supervised-anatomical-embedding-v2
  ☆72Updated last year
• murong-xu / CADS
  🩻 Whole-body CT segmentation made simple: 22,022 scans, 167 structures, one open solution.
  ☆57Updated last month
• YutingHe-list / GVSL
  ☆69Updated 2 years ago
• TaWald / nnUNet
  ☆43Updated last week
• uni-medical / MedIM
  One-line code to get SoTA pre-trained Medical Image Models ready in PyTorch.
  ☆47Updated 9 months ago
• MrGiovanni / R-Super
  [MICCAI 2025 Best Paper Award Runner-up] Learning Segmentation from Radiology Reports
  ☆97Updated this week
• alibaba-damo-academy / same
  Medical image registration, affine and deformable registration
  ☆32Updated 10 months ago
• MIC-DKFZ / MedVol
  ☆16Updated last month
• MIC-DKFZ / MultiTalent
  Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"
  ☆62Updated 5 months ago
• moucheng2017 / EM-BPL-Semi-Seg
  [MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation
  ☆40Updated 8 months ago
• ReubenDo / MHVAE
  ☆15Updated 2 years ago
• MIC-DKFZ / LesionLocator
  LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.
  ☆85Updated last month
• uni-medical / A-Eval
  MedIA 2025 | A-Eval: A Benchmark for Cross-Dataset and Cross-Modality Evaluation of Abdominal Multi-Organ Segmentation
  ☆33Updated 11 months ago
• shangqigao / BayeSeg
  The official implementation of "Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmen…
  ☆41Updated 3 years ago
• Schuture / Quality-Sentinel
  This is the repository of Quality Sentinel, a label quality evaluation model for medical image segmentation.
  ☆22Updated last month
• Luoxd1996 / MSHub
  MSHub: Medical Image Segmentation Hub with Pre-trained nnUNets
  ☆23Updated 10 months ago
• MIC-DKFZ / nnssl
  ☆124Updated 3 months ago
• daviddmc / SVoRT
  SVoRT: Iterative Transformer for Slice-to-Volume Registration in Fetal Brain MRI
  ☆44Updated 2 years ago
• PengchengShi1220 / cbDice
  [MICCAI 2024] Centerline Boundary Dice Loss for Vascular Segmentation
  ☆80Updated last month
• MAI-Lab-West-China-Hospital / LaMIM
  Large Medical Image Foundation Model
  ☆17Updated 2 years ago
• HiLab-git / SegRap2023
  [SegRap2023&MedIA2025]A challenge about organ-at-risk and gross-tumor-volume segmentation in adaptive radiotherapy hosted on MICCAI2023.
  ☆30Updated 10 months ago
• alibaba-damo-academy / pixel-lesion-patient-network
  ☆31Updated 2 years ago
• pangshumao / DGMSNet
  ☆14Updated 2 years ago
• kerem-cekmeceli / Foundation-Models-for-Medical-Imagery
  Training and Tuning Strategies for Foundation Models in Medical Imaging
  ☆25Updated 4 months ago
• HINTLab / pulmonary-tree-labeling
  [MedIA‘25] Efficient anatomical labeling of pulmonary tree structures via deep point-graph representation-based implicit fields
  ☆42Updated last year
• MrGiovanni / PanTS
  [NeurIPS 2025] PanTS: The Pancreatic Tumor Segmentation Dataset. PanTS enables development and external evaluation of AI for pancreatic t…
  ☆91Updated this week
• iMED-Lab / ER-Net
  3D vessel-like structure segmentation in pytorch
  ☆32Updated 2 years ago
• PengchengShi1220 / NexToU
  NexToU: Efficient Topology-Aware U-Net for Medical Image Segmentation
  ☆80Updated 2 months ago