Genomics Visualization Retrieval for Authoring with Multimodality
☆18Jun 19, 2026Updated 4 months ago
Alternatives and similar repositories for geranium
Users that are interested in geranium are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- JavaScript Library for WordStream - Topic evolution, using D3js☆13Oct 25, 2025Updated last year
- Holoviz Anndata Interface☆14Oct 19, 2026Updated last week
- ☆21Oct 15, 2026Updated 2 weeks ago
- Analysis framework for morphological profiling data☆14Updated this week
- Links between modalities in mudata☆17Oct 16, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of…☆16Updated this week
- A lightweight end-to-end NLP and visualization platform to make WordStream.☆45Apr 16, 2023Updated 3 years ago
- zod schemas for ome-ngff☆11Nov 7, 2025Updated 11 months ago
- ☆13May 29, 2024Updated 2 years ago
- Discoverability for gene search☆13Feb 6, 2023Updated 3 years ago
- Jupyter Notebooks and other code for Altair-based Interactive UpSet Plots☆31Dec 1, 2021Updated 4 years ago
- ☆14Apr 3, 2025Updated last year
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 7 months ago
- A Structured Grammar for Chart Annotation☆15May 8, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Aug 8, 2026Updated 2 months ago
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- ☆13Updated this week
- ☆14Nov 6, 2025Updated 11 months ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆55Updated this week
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Updated this week
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 24, 2026Updated 2 months ago
- ☆11Dec 16, 2025Updated 10 months ago
- LiT (Zero-Shot Transfer with Locked-image text Tuning) image and text encoder models, working in the browser☆11May 16, 2022Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization☆14Apr 11, 2026Updated 6 months ago
- Milume: explore spatial biology in your notebook. Layer images, cells, and transcripts in 3D, in one reactive widget.☆32Updated this week
- ☆12May 4, 2021Updated 5 years ago
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆16Feb 27, 2026Updated 8 months ago
- install libraries required to use qt on github action (does not install qt itself)☆19Mar 31, 2026Updated 6 months ago
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 7 years ago
- a web-based interactive browser of a survey on ML4VIS studies☆12Aug 7, 2024Updated 2 years ago
- ChartSeer: Interactive Steering Exploratory Visual Analysis with Machine Intelligence☆38Apr 13, 2024Updated 2 years ago
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆22Jun 9, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Useful bash one-liners for bioinformatics.☆10Jun 26, 2017Updated 9 years ago
- A web-based application to perform Over-Representation Analysis (ORA) using clusterProfiler and shiny R libraries☆12Jan 22, 2020Updated 6 years ago
- An Automated RNASeq Analysis Pipeline (Differential expression to gene enrichment)☆10Oct 25, 2021Updated 5 years ago
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Nov 10, 2023Updated 2 years ago
- A Jupyter widget for comparing two embeddings with shared labels by their confusion, neighborhoods, and size.☆51Nov 14, 2024Updated last year
- Pydantic-based binary struct serialization for Python. Define C-compatible binary formats with type hints, pack/unpack network protocols,…☆11Mar 25, 2026Updated 7 months ago
- Agglomerative hierarchical clustering in JavaScript☆19Dec 17, 2024Updated last year