Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized.
☆21Sep 25, 2026Updated this week
Alternatives and similar repositories for germinate-vue
Users that are interested in germinate-vue are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites☆78Updated this week
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated last year
- 这是一个基于AIot技术的智能育种箱，集成了温湿度、光照、浇灌、气体等一系列环境参数的监控和控制功能。☆12Mar 8, 2025Updated last year
- Efficient indexing and querying of annotations in a pangenome graph☆10Oct 29, 2025Updated 10 months ago
- A versatile, fully open-source pipeline to extract phenotypic measurements from plant images☆52May 26, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Pipeline to Extract Plant Phenotypes from Reference Data☆25Feb 24, 2025Updated last year
- ☆14Sep 11, 2026Updated 2 weeks ago
- Plant breeding simulations with AlphaSimR☆33Jan 5, 2025Updated last year
- Analysis tools for SLEAP-based plant root phenotyping.☆14Updated this week
- Open-PhenoLiDAR is an open-source package from the integration of LiDAR sensors in plant phenotyping and crop monitoring applications.☆54Apr 24, 2022Updated 4 years ago
- ☆16Jun 30, 2022Updated 4 years ago
- Code necessary to reproduce experiments in "FloraBERT: cross-species transfer learning with attention-based neural networks for gene expr…☆13Jul 6, 2022Updated 4 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 6 years ago
- An explainable Deep Machine Vision framework for Plant Stress Phenotyping☆17Jun 29, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Simple web-based calculator for the game Foundry.☆12Jun 10, 2024Updated 2 years ago
- Upscaling SV detection to a multi-population level.☆22Jul 28, 2025Updated last year
- Implementation of the 3D reconstruction pipeline optimized for plant branching structures.☆19Feb 24, 2025Updated last year
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- 🕶️ A list of third party FarmBot software projects.☆20Oct 29, 2021Updated 4 years ago
- 整理農業開放資料相關資源與專案☆15Aug 10, 2020Updated 6 years ago
- Control the Vötschtechnik (Weiss Technik) climate chamber using Python☆20Feb 8, 2026Updated 7 months ago
- Soybean seed localization and counting based on dot annotated infield images☆30Jul 3, 2025Updated last year
- CViTjs - Chromosome Viewing Tool. A javascript tool for quick whole-genome views of data.☆12Jan 15, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- official build specifications for jupyter☆13Jun 3, 2021Updated 5 years ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 6 years ago
- The code for the Doing More With Less: A Multi-Task Deep Learning Approach in Plant Phenotyping paper, Frontiers in Plant Science☆16Jan 10, 2020Updated 6 years ago
- An open-source GUI for reconstructing plant 3D architecture from laser scans.☆32Sep 9, 2026Updated 2 weeks ago
- BookStack，基于MinDoc，使用Beego开发的在线文档管理系统，功能类似Gitbook和看云!☆13Jul 23, 2024Updated 2 years ago
- phylogenetic networks using ggplot2 and ggtree☆13Dec 24, 2024Updated last year
- The official repository for the paper: Scalable learning for bridging the species gap in image-based plant phenotyping.☆27Apr 24, 2025Updated last year
- Chromax is a breeding simulator based on JAX.☆10Jun 6, 2025Updated last year
- A tool for discovering transposable elements and describing patterns of genome evolution☆32Apr 23, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A Robust Leaf Surface Reconstruction Method for 3D Plant Phenotyping☆19Dec 12, 2023Updated 2 years ago
- script that convert vcf file into genotype data matrix to input DIYABC program.☆12Jul 9, 2015Updated 11 years ago
- A Rust library for concatenating string slices into owned strings.☆17Jul 13, 2023Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆35Sep 4, 2026Updated 3 weeks ago
- Accurate Machine Learning Based Germination Detection, Prediction and Quality Assessment of Different Seed Cultivars☆18Jul 24, 2023Updated 3 years ago
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆11Feb 22, 2024Updated 2 years ago
- Software for detecting transposable element insertions from next-generation sequencing data☆11Feb 24, 2023Updated 3 years ago