germinateplatform / germinate-vueLinks
Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized.
☆18Updated last week
Alternatives and similar repositories for germinate-vue
Users that are interested in germinate-vue are comparing it to the libraries listed below
Sorting:
- Scripts and code for Kākāpō genomic data☆14Updated 2 years ago
- Flavonoids are specialized metabolites in plants that have numerous functions including protection against abiotic stresses, pigmentation…☆19Updated last week
- VCF Observer is a VCF file analysis, comparison, and visualization tool.☆18Updated 9 months ago
- Clair3-Trio: variant calling in trio using Nanopore long-reads☆16Updated last year
- The PanGenome Graph Builder☆16Updated last year
- PhyloSD: Phylogenomic Subgenome Detection pipeline☆11Updated 3 years ago
- Workflow for identifying and classifying homologous gene/protein sequences☆20Updated 2 weeks ago
- Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health con…☆56Updated this week
- A tool for phasing and imputing haplotypes in 10k+ low coverage sequencing samples☆10Updated 4 years ago
- Workshop on Genomics - Genomics Adventure☆42Updated 4 months ago
- AMBER: Assessment of Metagenome BinnERs☆31Updated 9 months ago
- Tree Health and Plant Biosecurity Initiative - Phytophthora ITS1 Classifier Tool☆10Updated last week
- Transformer-based sequence correction method for genome assembly polishing☆86Updated 7 months ago
- NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.☆62Updated last week
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆25Updated last week
- Pipeline for the identification of (coding) gene structures in draft genomes.☆30Updated last year
- fork of the GPU genome aligner☆20Updated 2 weeks ago
- This is the Haplotypo repository☆22Updated last year
- VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant…☆15Updated last year
- Very large scale k-mer counting and analysis on Apache Spark.☆18Updated last year
- Deep learning for Metagenome Assembly Error Detection☆25Updated 4 years ago
- Metalign: efficient alignment-based metagenomic profiling via containment min hash☆33Updated 2 years ago
- Portable WDL workflows for CZ ID production pipelines☆47Updated 4 months ago
- Accelerated genomics workflows in the Workflow Description Language☆34Updated last year
- NastyBugs: a simple method for extracting antimicrobial resistance information from metagenomes☆22Updated 6 years ago
- A tool for exploring large trees in the browser☆117Updated 2 weeks ago
- ☆19Updated 2 weeks ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.☆31Updated 3 weeks ago
- Synteny Mapping and Analysis Program☆27Updated 2 weeks ago