Source code for OpenCOVID, an individual-based model of SARS-CoV-2 transmission and COVID-19 disease dynamics.
☆12Jul 16, 2024Updated 2 years ago
Alternatives and similar repositories for OpenCOVID
Users that are interested in OpenCOVID are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Aug 31, 2022Updated 3 years ago
- A deque for R.☆29Mar 13, 2022Updated 4 years ago
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆31Jul 26, 2026Updated 2 weeks ago
- Teaching materials for MCMC I module in the Summer Institute in Statistics and Modeling in Infectious Diseases (SISMID)☆24Jul 13, 2021Updated 5 years ago
- ☆15Jun 4, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Data and forecast submission repository for the 2023 CDC West Nile virus Forecasting Challenge☆11Oct 30, 2023Updated 2 years ago
- This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.☆11Jul 31, 2020Updated 6 years ago
- ☆11Apr 15, 2020Updated 6 years ago
- The Flexible Epidemic Modeling Pipeline☆11Dec 15, 2025Updated 7 months ago
- OpenABM-Covid19: an agent-based model for modelling the spread of SARS-CoV-2 (coronavirus) and control interventions for the Covid-19 epi…☆130Oct 9, 2025Updated 10 months ago
- Source code for "When and How to Lift the Lockdown? Global COVID-19 Scenario Analysis and Policy Assessment using Compartmental Gaussian …☆10May 30, 2021Updated 5 years ago
- Corvid, an agent-based SARS-CoV-2 (COVID 2019) transmission model☆13Jan 21, 2021Updated 5 years ago
- UKB RAP 平台使用教程 - UK Biobank Research Analysis Platform 完整中文指南 | CC BY-NC-ND 4.0☆30Feb 17, 2026Updated 5 months ago
- The realization of Kernel Principle Component Analysis (KPCA) and its applications (Code + Description).☆12Sep 9, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆21Sep 12, 2025Updated 11 months ago
- Models and infrastructure for routine forecasting of respiratory disease burden☆16Updated this week
- R package that provides an implementation of the generic adaptive Monte Carlo Markov chain sampler proposed by Vihola (2011).☆10Jan 29, 2024Updated 2 years ago
- Tools for building predictive models in epidemiology.☆17Jul 20, 2026Updated 3 weeks ago
- Additional censored event tools for Distributions.jl☆15Updated this week
- Time control for simulations☆11Jan 18, 2023Updated 3 years ago
- ☆15Aug 18, 2021Updated 4 years ago
- ☆12Jan 29, 2020Updated 6 years ago
- Collated optimization models from numerous sources☆13Jun 18, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Parse Cloud Code for retrieving and storying Tweets from the Twitter API☆11Jun 11, 2015Updated 11 years ago
- ☆16Jun 28, 2022Updated 4 years ago
- Discrete-Event Simulation in R☆11Sep 14, 2017Updated 8 years ago
- Optimise PCR primer-set grouping for genetics research☆18Jun 3, 2026Updated 2 months ago
- ☆14Sep 23, 2019Updated 6 years ago
- R package wrapper for the C++ header-only library Xsimd that provides parallelized math implementations using SIMD☆12Jan 22, 2026Updated 6 months ago
- Applied category theory applied to epidemiological models☆12Aug 7, 2024Updated 2 years ago
- Automated C Code Generation for Use with the 'deSolve' and 'bvpSolve' Packages☆11Jun 8, 2026Updated 2 months ago
- R package for simulating and analyzing temporally autocorrelated populations.☆10Apr 11, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- data augmentation on python☆35Jan 7, 2018Updated 8 years ago
- This project demonstrates the PathRAG implementation using a team of 6 AI agents at PhD level to show how PathRAG prunes graph-based RAG …☆15Feb 27, 2025Updated last year
- miscellaneous talks and small projects☆11Updated this week
- ☆17Dec 6, 2020Updated 5 years ago
- Ring buffers☆12Dec 12, 2025Updated 8 months ago
- ☆22Jan 23, 2021Updated 5 years ago
- Rcpp Example for accessing NLopt☆14Jul 4, 2026Updated last month