JonathanAMichaels / PixelProcessingPipelineLinks
This toolbox easily and automatically processes Neuropixels and Myomatrix data recorded during experiments
☆14Updated last year
Alternatives and similar repositories for PixelProcessingPipeline
Users that are interested in PixelProcessingPipeline are comparing it to the libraries listed below
Sorting:
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 2 weeks ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- ☆60Updated 3 years ago
- A Matlab interface for reading and writing NWB files☆57Updated last week
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆66Updated 2 months ago
- A spike raster plot from spike time stamps with optional trial and group data.☆12Updated last year
- cortex lab code for electrophysiology☆85Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆56Updated 2 years ago
- jPCA for Neural Data Analysis in Python☆52Updated 2 years ago
- Information about Neuropixels electrode arrays☆96Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 2 weeks ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 2 months ago
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆22Updated last week
- ☆18Updated last month
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated last month
- Tutorials for using SpikeInterface on extracellular datasets.☆68Updated 2 years ago
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- Decoding and geometrical analysis of neural activity with built-in best practices☆46Updated 2 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆73Updated 5 years ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆15Updated 7 years ago
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆67Updated last month
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆52Updated 4 months ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆32Updated 5 months ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆59Updated 10 months ago