dfsp-spirit / brainload
A python module designed to reduce your brain load while accessing FreeSurfer brain surface and morphometry data files of single subjects and groups.
☆9Updated last year
Related projects: ⓘ
- DataLad extension for neuroimaging research☆17Updated 2 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆64Updated 9 months ago
- a standalone fork of nipy/nibabel#656☆28Updated this week
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated last year
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆31Updated 2 months ago
- fMRIPrep-Infants - A robust, transparent workflow tailored for neonate and infant MRI☆20Updated this week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆87Updated 2 weeks ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆26Updated last week
- A Python implementation of 'dual-coding'☆39Updated 4 months ago
- Plotting 4 brain surface views on a single matplotlib figure☆11Updated 2 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆72Updated 3 years ago
- Processing tools for high-resolution neuroimaging☆63Updated 2 weeks ago
- Open-source eddy-current and head-motion correction for dMRI.☆13Updated 2 weeks ago
- Automated Fiber Quantification ... in Python☆56Updated 2 weeks ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆47Updated 9 months ago
- BIDS app wrapping recon-all from FreeSurfer☆40Updated 4 months ago
- Scripts and documentation for the PCP's protocol for assessing data quality.☆40Updated 2 years ago
- niimath - a clone of fslmaths. Try the live demo:☆53Updated last week
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆51Updated last week
- Fast regression and mediation analysis of vertex or voxel MRI data with TFCE☆29Updated last year
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆35Updated 2 years ago
- Introduction to dMRI☆23Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆58Updated 2 months ago
- Vogt-Bailey index toolbox in Python☆12Updated 3 weeks ago
- WU-Minn HCP1200 Data: 3T/7T MR scans from young healthy adults twins and non-twin siblings (ages 22-35) [T1w, T2w, resting-state and task…☆36Updated 2 years ago
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆26Updated 3 years ago
- Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data☆19Updated 5 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆85Updated 3 months ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/e…☆35Updated 2 weeks ago
- Schedule and resources from the OHBM Open Science Room: Rome 2019☆16Updated 5 years ago
- The QDECR package for vertex-wise analyses in R☆11Updated last year