GSTT-CSC / TotalSegmentator-AIDELinks
TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.
☆31Updated last year
Alternatives and similar repositories for TotalSegmentator-AIDE
Users that are interested in TotalSegmentator-AIDE are comparing it to the libraries listed below
Sorting:
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated last year
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆137Updated 3 months ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆110Updated 9 months ago
- Computed tomography to body composition (Comp2Comp).☆95Updated 3 weeks ago
- Precision medicine toolbox☆70Updated last year
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆43Updated 2 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆50Updated 2 months ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆51Updated 2 months ago
- MRISegmentator☆44Updated last month
- ☆139Updated last month
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆91Updated 2 weeks ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆72Updated 4 years ago
- Deep learning multi modality automated organ segmentation tools☆15Updated 8 months ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆70Updated last year
- DICOM RT-Struct to mask☆101Updated last year
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆51Updated last week
- Medical Image Radiomics Processor☆71Updated last month
- An AI-powered open-source medical image analysis toolbox☆63Updated last year
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆97Updated 3 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆96Updated 3 weeks ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆73Updated last week
- ☆94Updated last month
- ☆76Updated last month
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆78Updated last year
- Website for NA-MIC Project Weeks☆92Updated last week
- The easiest tool for experimenting with radiomics features.☆41Updated last year
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆270Updated last week
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆83Updated last year
- MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.☆50Updated last month
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 6 months ago