Alternatives and similar repositories for TotalSegmentator-AIDE:

Users that are interested in TotalSegmentator-AIDE are comparing it to the libraries listed below

• project-lighter / lighter
  Streamline deep learning experiments using config files
  ☆32Updated this week
• Sikerdebaard / dcmrtstruct2nii
  DICOM RT-Struct to mask
  ☆99Updated 11 months ago
• StanfordMIMI / Comp2Comp
  Computed tomography to body composition (Comp2Comp).
  ☆69Updated last month
• pyplati / platipy
  Processing Library and Analysis Toolkit for Medical Imaging in Python
  ☆122Updated 2 months ago
• UMEssen / SALT
  Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…
  ☆77Updated 4 months ago
• UMEssen / Body-and-Organ-Analysis
  BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…
  ☆27Updated 4 months ago
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆71Updated last month
• raidionics / Raidionics
  Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes
  ☆37Updated last week
• oncoray / mirp
  Medical Image Radiomics Processor
  ☆60Updated this week
• rachellea / ct-volume-preprocessing
  End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…
  ☆59Updated 4 years ago
• qurit-frizi / TMTV-Net
  This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-…
  ☆15Updated last month
• lassoan / SlicerMONAIAuto3DSeg
  Extension for 3D Slicer for running MONAI Auto3DSeg models
  ☆77Updated 2 weeks ago
• rcuocolo / PROSTATEx_masks
  Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.
  ☆79Updated 2 years ago
• pwoznicki / AutoRadiomics
  The easiest tool for experimenting with radiomics features.
  ☆39Updated 9 months ago
• bhklab / med-imagetools
  Transparent and reproducible medical image processing pipelines in Python.
  ☆42Updated this week
• primakov / precision-medicine-toolbox
  Precision medicine toolbox
  ☆69Updated 10 months ago
• MIC-DKFZ / BodyPartRegression
  ☆66Updated 9 months ago
• DIAGNijmegen / prostateMR_3D-CAD-csPCa
  Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…
  ☆40Updated 3 years ago
• Slicer / SlicerLungCTAnalyzer
  This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.
  ☆75Updated 4 months ago
• amine0110 / nifti2dicom
  ☆55Updated 11 months ago
• DIAGNijmegen / picai_labels
  Annotations for the PI-CAI Challenge: Public Training and Development Dataset
  ☆56Updated 4 months ago
• neuronflow / BraTS-Toolkit
  Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
  ☆81Updated 4 months ago
• MStarmans91 / WORC
  Workflow for Optimal Radiomics Classification
  ☆73Updated 3 weeks ago
• simonsf / RTP-Net
  ☆32Updated last year
• antonioguj / bronchinet
  Airway segmentation from chest CTs using deep Convolutional Neural Networks
  ☆65Updated 7 months ago
• SuperElastix / ElastixModelZoo
  Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix
  ☆48Updated last week
• aqqush / CT_BET
  Robust Brain Extraction Tool for CT Head Images
  ☆45Updated 4 years ago
• ubern-mia / bender
  This repository supports the BENDER series of videos for the MICCAI Education Challenge, 2022.
  ☆12Updated last year
• pieper / dicomsort
  A project to provide custom sorting and renaming of dicom files
  ☆76Updated 7 months ago