WCHN / CTsegLinks
Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
☆78Updated last year
Alternatives and similar repositories for CTseg
Users that are interested in CTseg are comparing it to the libraries listed below
Sorting:
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆154Updated 3 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆107Updated 2 months ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17Updated 5 months ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆172Updated last year
- An AI-powered open-source medical image analysis toolbox☆68Updated last year
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 7 months ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆237Updated 3 weeks ago
- A project to provide custom sorting and renaming of dicom files☆79Updated 5 months ago
- MIRTK based SVR reconstruction☆59Updated 6 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 2 months ago
- Automated deep-learning based brain tumor segmentation on MRI☆35Updated 3 years ago
- Brain Extraction Tool in Python☆42Updated 7 months ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆37Updated 4 years ago
- Robust Brain Extraction Tool for CT Head Images☆49Updated 5 years ago
- Segment Source Distribution☆75Updated 3 years ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆102Updated last month
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆55Updated 2 months ago
- nii2dcm: NIfTI to DICOM creation with Python☆82Updated 5 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆100Updated last month
- Computed tomography to body composition (Comp2Comp).☆97Updated last month
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago
- ☆30Updated 3 years ago
- Very fast greedy diffeomorphic registration code☆80Updated 5 months ago
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆38Updated 2 years ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆76Updated this week
- Implementation of the DeepVesselNet deep learning network☆152Updated 2 years ago
- Repository of hand corrected skullstripping for the Enhanced Rockland Sample Neurofeedback Study☆19Updated 4 years ago
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆93Updated last month
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆51Updated 3 months ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆32Updated last year