End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality Prediction with Large-Scale Chest Computed Tomography Volumes."
☆81Oct 15, 2020Updated 5 years ago
Alternatives and similar repositories for ct-volume-preprocessing
Users that are interested in ct-volume-preprocessing are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Machine learning models for multi-organ, multi-disease prediction in chest CT volumes. From paper Draelos et al. "Machine-Learning-Based …☆39Dec 8, 2022Updated 3 years ago
- Automatic extraction of structured labels from radiology reports. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality …☆15Jul 16, 2022Updated 4 years ago
- This repository collates the models for CT to MRI synthesis. MRIs have benefits over CTs: they have better soft tissue contrast and regis…☆21Feb 8, 2025Updated last year
- CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN…☆27May 16, 2021Updated 5 years ago
- This Repo Will contain the Preprocessing Code for 3D Medical Imaging☆218Jul 22, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis☆11Apr 25, 2025Updated last year
- Medical software for Processing multi-Parametric images Pipelines☆44Jan 28, 2026Updated 7 months ago
- LoDoPaB-CT Grand Challenge Code☆14Dec 18, 2020Updated 5 years ago
- Iterative Reconstruction for Low-Dose CT using Deep Gradient Priors of Generative Model☆23Dec 25, 2025Updated 9 months ago
- [ICML-2025] We introduce Lie group Relative position Encodings (LieRE) that goes beyond RoPE in supporting n-dimensional inputs.☆14Aug 8, 2025Updated last year
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17May 8, 2025Updated last year
- Code for the paper "Analysis and comparison of cycle-consistent adversarial networks for CBCT to CT translation for adaptive radiotherapy…☆19Oct 19, 2023Updated 2 years ago
- A module for 3D image augmentations for deep learning, specifically medical images such as CT, MRI.☆27Jul 14, 2020Updated 6 years ago
- Generates CT images from MRI using cycleGAN.☆23Jan 10, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆13Nov 1, 2025Updated 10 months ago
- Source code for the paper: "Deep Segmentation of the Mandibular Canal: a New 3D Annotated Dataset of CBCT Volumes.", IEEE Access☆23Dec 5, 2022Updated 3 years ago
- 3DSlicer plugin for inpainting lung nodules in 3D chest CT data.☆11Dec 2, 2024Updated last year
- A collection of tools for the analysis of biological data☆12Mar 22, 2016Updated 10 years ago
- Motion-compensated low-rank reconstruction for simultaneous structural and functional UTE lung MRI doi: 10.1002/mrm.29703☆15Feb 4, 2025Updated last year
- ☆26Nov 27, 2022Updated 3 years ago
- Convert CBCT images to CT like images☆41Nov 22, 2019Updated 6 years ago
- ☆18Jan 31, 2024Updated 2 years ago
- Official implementation of "Low-dose CT Denoising with Language-engaged Dual-space Alignment"☆14Mar 18, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Codes and data for paper "Rigid and Non-rigid Motion Artifact Reduction in X-ray CT using Attention Module"☆27Aug 12, 2022Updated 4 years ago
- Repository processes CT scanned images of human Lungs , which are in DICOM image format. Visualises the data in 3D and trains a 3D convo…☆24Aug 1, 2020Updated 6 years ago
- FSL randomise related scripts☆10Jan 10, 2022Updated 4 years ago
- simple-centerline-extraction☆18Jul 11, 2026Updated 2 months ago
- Using machine learning and image processing to classify lung cancer in CT scans☆35Jul 25, 2020Updated 6 years ago
- Segmentation of the heart, lungs and trachea on CT of the chest.☆12Oct 21, 2020Updated 5 years ago
- 3D NAS for Pulmonary Nodules Classification, PR 2021☆53Feb 19, 2021Updated 5 years ago
- 2D/3D biopolymer network extraction and quantification.☆21Mar 29, 2026Updated 5 months ago
- ☆15Mar 13, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- X-ray Cone Beam Computed Tomography: Simulation☆17Aug 25, 2026Updated last month
- ☆18Mar 13, 2024Updated 2 years ago
- An open brain MRI dataset and baseline evaluations for tumor recurrence prediction☆11Apr 29, 2024Updated 2 years ago
- This is a medical data visualization program. This takes in some medical DICOM, MRI, CT data and produces 3D model. There are also other …☆43Jul 8, 2026Updated 2 months ago
- ☆43Oct 18, 2020Updated 5 years ago
- A qt-based 3D data visualization tool.☆52Jul 20, 2022Updated 4 years ago
- ☆15Aug 8, 2023Updated 3 years ago