pogudingleb / SIANLinks
SIAN (Structural Identifiability ANalyser) is a software for assessing structural identifiability of ODE models.
☆22Updated 2 years ago
Alternatives and similar repositories for SIAN
Users that are interested in SIAN are comparing it to the libraries listed below
Sorting:
- Tools to generate and study moment equations for any chemical reaction network using various moment closure approximations☆46Updated 2 months ago
- Fast and automatic structural identifiability software for ODE systems☆125Updated 2 weeks ago
- Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices☆27Updated last week
- Material for a full course on applied nonlinear dynamics, nonlinear timeseries analysis, and complex systems, in Julia☆65Updated last year
- Implementation of SIAN in Julia☆31Updated last month
- A Julia package that implements a category of reaction (transportation) network-type dynamical systems.☆17Updated 2 months ago
- SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit☆44Updated 3 months ago
- learning state-space targets in dynamical systems☆28Updated last year
- Implementation of advanced Sequential Monte Carlo and particle MCMC algorithms☆61Updated 2 weeks ago
- CellMLToolkit.jl is a Julia library that connects CellML models to the Scientific Julia ecosystem.☆67Updated this week
- Finite State Projection algorithms for chemical reaction networks☆20Updated 3 months ago
- Nonnegative Matrix Factorization + k-means clustering and physics constraints for Unsupervised and Physics-Informed Machine Learning☆16Updated this week
- GenSSI 2.0 - Generating Series for testing Structural Identifiability☆15Updated last year
- Neural Estimation of Stochastic Simulations for Inference and Exploration☆19Updated 3 years ago
- A stochastic simulation framework in Julia.☆47Updated 6 months ago
- Fast uncertainty quantification for scientific machine learning (SciML) and differential equations☆69Updated last week
- ☆40Updated 3 years ago
- Selected Topics in Mathematical Optimization, now in Julia☆54Updated 3 years ago
- No need to train, he's a smooth operator☆45Updated 2 months ago
- ParameterEstimation.jl is a Julia package for estimating parameters and initial conditions of ODE models given measurement data.☆30Updated 2 weeks ago
- Latent Differential Equations models in Julia.☆38Updated 3 years ago
- Edge-weighted graphs compatible with Graphs.jl☆41Updated last week
- A Julia package to analyze protein sequences, structures, and evolutionary information☆83Updated last week
- Julia implementation of the bond graph framework☆19Updated last month
- A library of systems of partial differential equations, as defined with ModelingToolkit.jl in Julia☆28Updated 2 months ago
- Sleek implementations of the ZigZag, Boomerang and other assorted piecewise deterministic Markov processes for Markov Chain Monte Carlo i…☆104Updated 3 years ago
- Julia interface to the Systems Biology Markup Language (SBML) library☆30Updated 2 months ago
- Flexible and efficient persistent homology computation.☆76Updated last week
- Create parameter estimation problems for ODE models☆65Updated last week
- Estimators for probabilities, entropies, and other complexity measures derived from data in the context of nonlinear dynamics and complex…☆78Updated 3 weeks ago