SpikeInterface / spikeextractorsLinks
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
☆117Updated 3 years ago
Alternatives and similar repositories for spikeextractors
Users that are interested in spikeextractors are comparing it to the libraries listed below
Sorting:
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 4 months ago
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- Fast and scalable spike sorting in python☆95Updated 6 months ago
- IBL core shared libraries☆66Updated this week
- Tutorials for using SpikeInterface on extracellular datasets.☆68Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 3 weeks ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 weeks ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 8 months ago
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.☆55Updated 6 months ago
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆27Updated 4 months ago
- cortex lab code for electrophysiology☆85Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 3 weeks ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Elephant is the Electrophysiology Analysis Toolkit☆230Updated last week
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆28Updated this week
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆67Updated last month
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Visualization of electrophysiological data from Elephant☆24Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆66Updated 2 months ago