HennigLab / tndm
The official re-implementation of the Neurips 2021 paper, "Targeted Neural Dynamical Modeling".
☆10Updated 2 years ago
Alternatives and similar repositories for tndm:
Users that are interested in tndm are comparing it to the libraries listed below
- Machine Learning Methods for Neural Data Analysis☆13Updated 6 months ago
- Fast Automated Spike Tracker☆11Updated 5 years ago
- Exercises and examples for the latent dynamics workshop☆17Updated last year
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆64Updated last year
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- ☆9Updated 4 years ago
- ☆29Updated 2 years ago
- ☆47Updated 3 years ago
- ☆26Updated 7 months ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 7 years ago
- A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆19Updated last year
- IaC codebase for the NeuroCAAS Platform☆36Updated last year
- Matlab exercises with solutions to implement and visualise concepts from Sara Solla's talk on World Wide Neuro (Apr 29, 2020)☆20Updated 3 years ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆12Updated 10 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆25Updated last year
- Demixed Shared Component Analysis☆13Updated 4 years ago
- Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.☆39Updated last year
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆47Updated 4 months ago
- This reading list is centered around the practical application of linear dynamical systems models to predict neural data☆36Updated 3 years ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 2 years ago
- YASS: Yet Another Spike Sorter☆66Updated 2 years ago
- ☆49Updated 2 years ago
- ☆22Updated 3 months ago
- Code for "Inferring Latent Dynamics Underlying Neural Population Activity via Neural Differential Equations"☆9Updated 3 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…☆13Updated last year
- ☆74Updated 2 years ago
- Recordings of 10k neurons during spontaneous behaviors☆50Updated 10 months ago
- SpikeForest -- spike sorting analysis for website☆16Updated 4 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆33Updated last year