SETT-Centre-Data-and-AI / PteredactylLinks
A python module for redaction of personally identifiable information (PII) in clinical free-text
☆14Updated 8 months ago
Alternatives and similar repositories for Pteredactyl
Users that are interested in Pteredactyl are comparing it to the libraries listed below
Sorting:
- Baseline models for predicting Length of Stay☆10Updated 2 years ago
- A tool to help improve data quality standards in observational data science.☆163Updated this week
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated 3 weeks ago
- A Python implementation of Hierarchical Condition Categories☆105Updated 7 months ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆37Updated last year
- Python package to calculate comorbidity scores including Charlson Comorbidity Score and Elixhauser Score and their weighted variants.☆16Updated 2 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆82Updated 3 months ago
- Pipelines for generating large volumes of anonymous artificial data that share some of the characteristics of real NHS data☆30Updated 2 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆114Updated 5 months ago
- Streamlined Data Mapping to OMOP☆19Updated this week
- drgpy is a Python library for assigning a combination of diagnosis and procedure codes to Diagnosis Related Groups (MS-DRG) that is used …☆57Updated last year
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆68Updated 3 weeks ago
- ☆12Updated last month
- The missing middleware layer in healthcare AI 💫 🏥☆37Updated 3 weeks ago
- A starter dbt project and synthetic claims dataset for trying out the Tuva Project.☆25Updated 3 weeks ago
- Connector that loads FHIR r4 USCDIv3 JSON data from local file storage into the Tuva common data model in Snowflake.☆27Updated last month
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆81Updated 3 weeks ago
- Open drug data pipelines curated by pharmacists.☆64Updated this week
- Python utilities for working with FHIR, including libraries to build simple, flat FHIR views in BigQuery.☆90Updated last week
- An ASGI FHIR API framework built on top of FastAPI and FHIR Resources☆40Updated last week
- A Python implementation of the tools from H-CUP (Healthcare Cost and Utilization Project)☆65Updated 2 years ago
- ☆29Updated 2 years ago
- Tools for the Semi-Automatic Checking of Research Outputs. These are tools for researchers to use as drop-in replacements for common anal…☆18Updated last week
- An R package for performing various cohort diagnostics.☆46Updated last month
- Main repo including core data model, data marts, data quality tests, and terminology sets.☆267Updated this week
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆40Updated 7 months ago
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- Convert FHIR StructureDefinition into Python type annotations☆20Updated 7 months ago
- Course materials for OHDSI ETL tutorial☆48Updated 9 months ago