SETT-Centre-Data-and-AI / PteredactylLinks
A python module for redaction of personally identifiable information (PII) in clinical free-text. It builds on Presidio and is extremely easy to use for those getting started with PII redaction.
☆18Updated 2 months ago
Alternatives and similar repositories for Pteredactyl
Users that are interested in Pteredactyl are comparing it to the libraries listed below
Sorting:
- Model Context Protocol Server for the Observational Medical Outcomes Partnership (OMOP) Common Data Model☆21Updated last month
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated 2 years ago
- Baseline models for predicting Length of Stay☆10Updated 3 years ago
- Pipelines for generating large volumes of anonymous artificial data that share some of the characteristics of real NHS data☆35Updated 2 years ago
- A tool to help improve data quality standards in observational data science.☆171Updated this week
- An R package for performing various cohort diagnostics.☆48Updated last week
- A package supporting the conversion from Synthea CSV to OMOP CDM☆120Updated 11 months ago
- Python package to calculate comorbidity scores including Charlson Comorbidity Score and Elixhauser Score and their weighted variants.☆19Updated 2 weeks ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆35Updated last month
- A pipe friendly way to interact with an OMOP Common Data Model☆13Updated this week
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 8 months ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆74Updated last week
- Tools for the Semi-Automatic Checking of Research Outputs. These are tools for researchers to use as drop-in replacements for common anal…☆21Updated this week
- ☆11Updated 2 months ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆89Updated this week
- SQLAlchemy models for OHDSI OMOP Common Data Model☆13Updated last week
- An ETL pipeline to transform your EMP data to OMOP.☆15Updated 3 months ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆88Updated last month
- This project looks at creating a controlled vocabulary for DICOM Pt 6 Data Dictionary with a focus on CS code strings.☆12Updated last month
- NHS AI Lab Skunkworks project: Long Stayer Risk Stratification☆27Updated 3 years ago
- ETL Tool for converting datasets to OMOP CDM☆35Updated 3 years ago
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆44Updated last year
- Python package for converting FHIR as JSON into flat files (CSVs)☆34Updated 3 months ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Updated 5 years ago
- An ASGI FHIR API framework built on top of FastAPI and FHIR Resources☆55Updated 2 months ago
- drgpy is a Python library for assigning a combination of diagnosis and procedure codes to Diagnosis Related Groups (MS-DRG) that is used …☆64Updated 2 years ago
- Streamlined Data Mapping to OMOP☆20Updated this week
- Course materials for OHDSI ETL tutorial☆53Updated 4 months ago
- A starter dbt project and synthetic claims dataset for trying out the Tuva Project.☆31Updated last week