NKI-AI / ahcoreLinks
Ahcore is the AI for Oncology core computational pathology toolkit
☆16Updated last year
Alternatives and similar repositories for ahcore
Users that are interested in ahcore are comparing it to the libraries listed below
Sorting:
- Code used to create the DeepHistReg submission to the ANHIR challenge.☆31Updated 8 months ago
- Software used by the AGH team during the ANHIR challenge.☆28Updated 5 years ago
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆260Updated 2 weeks ago
- ☆67Updated last year
- ☆92Updated 6 months ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- Computed tomography to body composition (Comp2Comp).☆103Updated last month
- Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: h…☆195Updated 2 years ago
- PyTorch implementation of HighRes3DNet☆54Updated 5 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆140Updated last year
- Dlup are the Deep Learning Utilities for Pathology developed at the Netherlands Cancer Institute☆28Updated 3 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆313Updated 3 weeks ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- DeeperHistReg - Source Code☆83Updated last year
- Medical Image Radiomics Processor☆75Updated last month
- A grid sampler for larger-than-memory N-dimensional images☆26Updated last month
- Evaluation framework for oncology foundation models (FMs)☆144Updated last week
- DICOM RT-Struct to mask☆102Updated last year
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated last month
- Stain normalization tools for histological analysis and computational pathology☆166Updated last month
- Workflow for Optimal Radiomics Classification☆79Updated 2 weeks ago
- Deep Learning Registration of the Prostate☆56Updated last year
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆56Updated 2 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆172Updated 3 years ago
- Interactive Segmentation of Nucleus☆66Updated 3 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆89Updated 3 years ago
- ☆119Updated last week
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,…☆103Updated 2 months ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Updated last year