lilywang1988 / eSIRLinks
Extended state-space SIR epidemiological models
☆75Updated 3 years ago
Alternatives and similar repositories for eSIR
Users that are interested in eSIR are comparing it to the libraries listed below
Sorting:
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- Age-structured SEIR model for COVID-19 outbreak in Wuhan, China☆41Updated 5 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆39Updated 5 years ago
- A tool to estimate time varying instantaneous reproduction number during epidemics☆99Updated 4 months ago
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆55Updated 11 months ago
- Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…☆71Updated 2 years ago
- ☆53Updated last year
- SEIR transmission model of COVID-19. Documentation at:☆51Updated last year
- ☆40Updated last year
- Analysis code and data for COVID-19 age-specific clinical fraction☆23Updated 5 years ago
- Modelling transmission dynamics of COVID-19, while accounting for presymptomatic infectiousness, time-varying ascertainment rates, transm…☆21Updated 5 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆131Updated last week
- SEIR model for COVID-19 infection, including different clinical trajectories of infection☆195Updated 5 years ago
- Inferring high-resolution human mixing patterns for disease modeling☆47Updated 2 years ago
- FluSight Forecast Submissions☆19Updated last year
- R package for deriving social mixing matrices from survey data.☆41Updated 3 weeks ago
- Compartmental SEIQRD model to model the effects of government policies on SARS-CoV-2 spread in Belgium. Macro-economic Input-Output model…☆23Updated 8 months ago
- R package for statistical inference using partially observed Markov processes☆118Updated last week
- Public Available Code and Data to Reproduce Analyses in "Air pollution and COVID-19 mortality in the United States: Strengths and limitat…☆105Updated last year
- ☆89Updated 5 years ago
- Contemporary statistical inference for infectious disease models using Stan☆17Updated 6 years ago
- COVID-19 Scenario Modeling Hub☆67Updated 5 months ago
- Repository for all scripts required to replicate the CFR analysis for paper submission.☆71Updated 4 years ago
- Estimating the incubation time of the novel coronavirus (nCoV-2019) based on traveler data using coarse data tools☆56Updated 5 years ago
- Mathematical Modeling of Infectious Disease Dynamics☆257Updated 3 weeks ago
- ☆23Updated 4 years ago
- Data and analysis for the early COVID-19 outbreak☆27Updated 5 years ago
- Updates to the synthetic contact matrices☆38Updated 2 years ago
- Flu Scenario Modeling Hub☆12Updated 5 months ago
- Bayesian modeling of COVID-19☆31Updated 2 years ago