lilywang1988 / eSIR
Extended state-space SIR epidemiological models
☆73Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for eSIR
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated last year
- Age-structured SEIR model for COVID-19 outbreak in Wuhan, China☆40Updated 4 years ago
- A tool to estimate time varying instantaneous reproduction number during epidemics☆94Updated 2 months ago
- Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…☆68Updated last year
- Contemporary statistical inference for infectious disease models using Stan☆15Updated 5 years ago
- SEIR transmission model of COVID-19. Documentation at:☆50Updated 9 months ago
- Updates to the synthetic contact matrices☆36Updated last year
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆38Updated 4 years ago
- Data and analysis for the early COVID-19 outbreak☆27Updated 4 years ago
- Bayesian modeling of COVID-19☆30Updated last year
- R package for "Epidemics: Models and data using R"☆56Updated 2 years ago
- Modelling of the nCoV-2019 outbreak in Wuhan, China, by Jon Read, Jess Bridgen, and Chris Jewell at Lancaster University.☆74Updated 3 years ago
- Modelling transmission dynamics of COVID-19, while accounting for presymptomatic infectiousness, time-varying ascertainment rates, transm…☆21Updated 4 years ago
- COVID-19 Scenario Modeling Hub☆63Updated 3 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆115Updated this week
- Inferring high-resolution human mixing patterns for disease modeling☆41Updated last year
- ☆31Updated 4 years ago
- Analysis code and data for COVID-19 age-specific clinical fraction☆22Updated 4 years ago
- FluSight Forecast Submissions☆18Updated 6 months ago
- Basic Epidemic, Activity, and Response COVID-19 model☆31Updated 4 years ago
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆52Updated last month
- Teaching materials for MCMC I module in the Summer Institute in Statistics and Modeling in Infectious Diseases (SISMID)☆23Updated 3 years ago
- R package for statistical inference using partially observed Markov processes☆114Updated this week
- An Integrative Metaregression Framework for Descriptive Epidemiology☆51Updated last year
- ☆53Updated 10 months ago
- ☆40Updated 4 months ago
- ☆88Updated 4 years ago
- An R package with Dynamic Models of infectious diseases☆29Updated last week
- Semiparametric Bayesian Inference for the Transmission Dynamics of COVID-19 with a State-Space Model☆9Updated 4 years ago
- R package for deriving social mixing matrices from survey data.☆38Updated this week