Alternatives and similar repositories for lolbo

Users that are interested in lolbo are comparing it to the libraries listed below

• samuelstanton / lambo
  Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)
  ☆71Updated last year
• pascalnotin / uncertainty_guided_optimization
  Official repository for the paper "Improving black-box optimization in VAE latent space using decoder uncertainty" (Pascal Notin, José Mi…
  ☆31Updated 2 years ago
• MJ10 / BioSeq-GFN-AL
  Code for "Biological Sequence Design with GFlowNets", 2022
  ☆74Updated 2 years ago
• GFNOrg / multi-objective-gfn
  Code for "Multi-Objective GFlowNets"
  ☆16Updated 2 years ago
• cambridge-mlg / weighted-retraining
  ☆44Updated 2 years ago
• GGchen1997 / BDI
  This repository is the official implementation of Bidirectional Learning for Offline Infinite-width Model-based Optimization (NeurIPS 202…
  ☆15Updated 2 years ago
• andrew-cr / jump-diffusion
  ☆33Updated last year
• jarridrb / DEM
  Code for the paper Iterated Denoising Energy Matching for Sampling from Boltzmann Densities.
  ☆63Updated 6 months ago
• vict0rsch / faenet
  ☆33Updated 7 months ago
• vgsatorras / en_flows
  ☆59Updated 3 years ago
• hnisonoff / discrete_guidance
  Code for our paper "Unlocking Guidance for Discrete State-Space Diffusion and Flow Models"
  ☆29Updated 5 months ago
• plainerman / Variational-Doob
  Lagrangian formulation of Doob's h-transform allowing for efficient rare event sampling
  ☆52Updated 6 months ago
• senya-ashukha / simple-equivariant-gnn
  A short and easy PyTorch implementation of E(n) Equivariant Graph Neural Networks
  ☆139Updated 3 years ago
• prescient-design / holo-bench
  Benchmark for Biophysical Sequence Optimization Algorithms
  ☆20Updated 4 months ago
• wenhao-gao / mol_opt
  ☆220Updated last year
• SeulLee05 / MOOD
  Official code repository for the paper Exploring Chemical Space with Score-based Out-of-distribution Generation (ICML 2023)
  ☆39Updated last year
• martaskrt / fkc-diffusion
  ☆37Updated 3 months ago
• henrymoss / BOSS
  Bayesian Optimisation for String Spaces
  ☆24Updated 3 years ago
• gmh14 / data_efficient_grammar
  [ICLR 2022] Data-Efficient Graph Grammar Learning for Molecular Generation
  ☆97Updated 2 years ago
• Genentech / walk-jump
  Official repository for discrete Walk-Jump Sampling (dWJS)
  ☆53Updated last year
• leojklarner / context-guided-diffusion
  Code for the paper Context-Guided Diffusion for Out-of-Distribution Molecular and Protein Design
  ☆39Updated last year
• tung-nd / ExPT
  ☆18Updated last year
• ml-jku / clamp
  Code for the paper Enhancing Activity Prediction Models in Drug Discovery with the Ability to Understand Human Language
  ☆103Updated last year
• brandontrabucco / design-bench
  Benchmarks for Model-Based Optimization
  ☆95Updated last year
• olsdavis / fisher-flow
  Official implementation of Fisher-Flow Matching (NeurIPS 2024).
  ☆29Updated 11 months ago
• Ryan-Rhys / Constrained-Bayesian-Optimisation-for-Automatic-Chemical-Design
  Code to accompany the paper "Constrained Bayesian Optimisation for Automatic Chemical Design" https://pubs.rsc.org/en/content/articlehtml…
  ☆52Updated 2 years ago
• andrew-cr / discrete_flow_models
  Code for the paper https://arxiv.org/abs/2402.04997
  ☆96Updated last year
• MachineLearningLifeScience / poli
  A library of discrete objectives
  ☆23Updated this week
• DeepGraphLearning / GraphAF
  ☆57Updated 4 years ago
• HannesStark / dirichlet-flow-matching
  ☆124Updated last year