FabianIsensee / BatchViewerLinks
A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
☆51Updated 8 months ago
Alternatives and similar repositories for BatchViewer
Users that are interested in BatchViewer are comparing it to the libraries listed below
Sorting:
- [IEEE JBHI'21] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!☆168Updated last year
- This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…☆51Updated 2 years ago
- Official Keras & PyTorch Implementation and Pre-trained Models for Semantic Genesis - MICCAI 2020☆82Updated 3 years ago
- Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound☆73Updated 4 years ago
- Multi-Planar UNet for autonomous segmentation of 3D medical images☆196Updated 2 years ago
- matlab and python wrap of crf and dense crf, both 2d and 3d are supported☆170Updated 2 years ago
- DeepSEED: 3D Squeeze-and-Excitation Encoder-Decoder ConvNets for Pulmonary Nodule Detection☆114Updated 2 years ago
- Scripts for the preprocessing of LIDC-IDRI data☆82Updated 5 years ago
- An example project of how to use a U-Net for segmentation on medical images with PyTorch.☆148Updated last year
- Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019☆128Updated 2 years ago
- COVID-19 Pneumonia Lesion segmentation network☆88Updated 4 years ago
- ☆171Updated 4 years ago
- If the code is helpful for your work, please cite our paper "Hybrid Loss Guided Convolutional Networks for Whole Heart Parsing" in STACOM…☆85Updated 5 years ago
- [BrainLes2019] Multi-step cascaded network for brain tumor segmentations (tensorflow)☆98Updated 2 years ago
- VNet for 3d volume segmentation☆45Updated 4 years ago
- [TMI'20] Unpaired Multi-modal Segmentation via Knowledge Distillation☆114Updated 2 years ago
- MICCAI 2020 RibFrac Challenge: Rib Fracture Detection and Classification (3D Instance Segmentation)☆52Updated 4 years ago
- ☆81Updated 2 years ago
- PIPO-FAN for multi organ segmentation over partial labeled datasets using pytorch☆63Updated 4 years ago
- Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation☆56Updated 2 years ago
- Evaluation code of CHAOS challenge in MATLAB, Python and Julia languages.☆57Updated 6 years ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D U…☆111Updated 5 years ago
- The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge☆179Updated 2 years ago
- PyTorch implementation of OrganSegRSTN - CVPR 2018☆108Updated 3 years ago
- Scripts to work with the chaos challenge☆26Updated 6 years ago
- winning method for WMH segmentation challenge in MICCAI 2017☆48Updated 5 years ago
- SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth☆70Updated 6 years ago
- ☆61Updated 6 years ago
- A SlidingWindow-Free Accurate and Fast 3D Medical Image Segmentation Framework☆123Updated 6 years ago
- Weakly supervised 3D classification of multi-disease chest CT scans using multi-resolution deep segmentation features via dual-stage CNN …☆34Updated 5 years ago