FabianIsensee / BatchViewerLinks
A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
☆52Updated 9 months ago
Alternatives and similar repositories for BatchViewer
Users that are interested in BatchViewer are comparing it to the libraries listed below
Sorting:
- An example project of how to use a U-Net for segmentation on medical images with PyTorch.☆150Updated last year
- [IEEE JBHI'21] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!☆168Updated last year
- Official Keras & PyTorch Implementation and Pre-trained Models for Semantic Genesis - MICCAI 2020☆83Updated 4 years ago
- Scripts for the preprocessing of LIDC-IDRI data☆83Updated 5 years ago
- This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…☆51Updated 2 years ago
- Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound☆73Updated 4 years ago
- The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge☆179Updated 2 years ago
- Multi-Planar UNet for autonomous segmentation of 3D medical images☆196Updated 2 years ago
- DeepSEED: 3D Squeeze-and-Excitation Encoder-Decoder ConvNets for Pulmonary Nodule Detection☆114Updated 2 years ago
- ☆171Updated 4 years ago
- COVID-19 Pneumonia Lesion segmentation network☆88Updated 4 years ago
- Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019☆128Updated 2 years ago
- matlab and python wrap of crf and dense crf, both 2d and 3d are supported☆170Updated 3 years ago
- Evaluation code of CHAOS challenge in MATLAB, Python and Julia languages.☆57Updated 6 years ago
- [TMI'20] Unpaired Multi-modal Segmentation via Knowledge Distillation☆115Updated 2 years ago
- If the code is helpful for your work, please cite our paper "Hybrid Loss Guided Convolutional Networks for Whole Heart Parsing" in STACOM…☆85Updated 6 years ago
- Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation☆56Updated 2 years ago
- MICCAI 2020 RibFrac Challenge: Rib Fracture Detection and Classification (3D Instance Segmentation)☆53Updated 4 years ago
- Weakly supervised 3D classification of multi-disease chest CT scans using multi-resolution deep segmentation features via dual-stage CNN …☆35Updated 5 years ago
- [BrainLes2019] Multi-step cascaded network for brain tumor segmentations (tensorflow)☆98Updated 2 years ago
- PIPO-FAN for multi organ segmentation over partial labeled datasets using pytorch☆64Updated 4 years ago
- PyTorch implementation of OrganSegRSTN - CVPR 2018☆108Updated 3 years ago
- abdominal multi-organ segmentation using pytorch☆134Updated 6 years ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D U…☆112Updated 5 years ago
- ☆186Updated 5 years ago
- Pytorch version of the HyperDenseNet deep neural network for multi-modal image segmentation☆79Updated 5 years ago
- A 3D U-Net Based Solution to BraTS 2019 in Keras☆51Updated 5 years ago
- ☆81Updated 2 years ago
- Public code for our submission to the 2017 ACDC Cardiac Segmentation challenge☆109Updated 2 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 4 years ago