FabianIsensee / BatchViewer
A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
☆51Updated 2 months ago
Alternatives and similar repositories for BatchViewer:
Users that are interested in BatchViewer are comparing it to the libraries listed below
- This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…☆51Updated 2 years ago
- COVID-19 Pneumonia Lesion segmentation network☆88Updated 3 years ago
- PIPO-FAN for multi organ segmentation over partial labeled datasets using pytorch☆62Updated 4 years ago
- Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound☆74Updated 4 years ago
- A PyTorch implementation of the Probabilistic U-Net, applied to probabilistic glioma growth☆43Updated 5 years ago
- Scripts for the preprocessing of LIDC-IDRI data☆78Updated 5 years ago
- ☆76Updated last year
- Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019☆126Updated 2 years ago
- X-Net: Brain Stroke Lesion Segmentation Based on Depthwise Seperable Convolution and Long Range Dependencies (MICCAI 2019)☆52Updated 4 years ago
- VNet for 3d volume segmentation☆44Updated 4 years ago
- Official Keras & PyTorch Implementation and Pre-trained Models for Semantic Genesis - MICCAI 2020☆81Updated 3 years ago
- ☆28Updated 6 years ago
- All credit goes to the authors listed at https://journals.plos.org/plosmedicine/article?id=10.1371/journal.pmed.1002699☆33Updated 6 years ago
- Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation☆53Updated last year
- Scripts to work with the chaos challenge☆25Updated 6 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆105Updated last year
- DeepSEED: 3D Squeeze-and-Excitation Encoder-Decoder ConvNets for Pulmonary Nodule Detection☆113Updated 2 years ago
- A 3D U-Net Based Solution to BraTS 2019 in Keras☆50Updated 4 years ago
- SDNet Keras implementation☆44Updated 4 years ago
- PyTorch implementation of OrganSegRSTN - CVPR 2018☆108Updated 3 years ago
- If the code is helpful for your work, please cite our paper "Hybrid Loss Guided Convolutional Networks for Whole Heart Parsing" in STACOM…☆85Updated 5 years ago
- SynSeg-Net: Synthetic Segmentation Without Target Modality Ground Truth☆68Updated 6 years ago
- ☆184Updated 5 years ago
- Elastic Boundary Projection for 3D Medical Image Segmentation - CVPR 2019☆65Updated 5 years ago
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆63Updated last year
- ☆168Updated 3 years ago
- Segmentation of knee cartilage tissues from DESS MRI☆22Updated last year
- Evaluation code of CHAOS challenge in MATLAB, Python and Julia languages.☆58Updated 5 years ago
- Source code for the paper "Shape-Aware Complementary-Task Learning for Multi-Organ Segmentation" as described in https://arxiv.org/abs/19…☆32Updated 2 years ago