An example project of how to use a U-Net for segmentation on medical images with PyTorch.
☆153Jul 25, 2024Updated 2 years ago
Alternatives and similar repositories for basic_unet_example
Users that are interested in basic_unet_example are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Feb 3, 2020Updated 6 years ago
- A framework for data augmentation for 2D and 3D image classification and segmentation☆1,175Oct 15, 2026Updated 2 weeks ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D U…☆163Sep 10, 2018Updated 8 years ago
- Manage your machine learning experiments with trixi - modular, reproducible, high fashion. An experiment infrastructure optimized for PyT…☆227Jan 13, 2021Updated 5 years ago
- ☆72Oct 10, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- residual attention unet for tumor segmentation (liver and brain)☆131Jun 4, 2019Updated 7 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆40Jul 14, 2021Updated 5 years ago
- Hyppopy is a python toolbox for blackbox optimization. It's purpose is to offer a unified and easy to use interface to a collection of so…☆27Apr 26, 2022Updated 4 years ago
- A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.☆53Feb 8, 2025Updated last year
- This repository implements pytorch version of the modifed 3D U-Net from Fabian Isensee et al. participating in BraTS2017☆222Sep 7, 2018Updated 8 years ago
- Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019☆129Nov 22, 2022Updated 3 years ago
- Scripts to work with the chaos challenge☆27Mar 4, 2019Updated 7 years ago
- A U-Net combined with a variational auto-encoder that is able to learn conditional distributions over semantic segmentations.☆23Dec 17, 2018Updated 7 years ago
- MICCAI2019:3D U$^2$-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation☆237Oct 18, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pre-trained model, code, and materials from the paper "Impact of Adversarial Examples on Deep Learning Models for Biomedical Image Segmen…☆60Jul 6, 2020Updated 6 years ago
- 3D Segmentation Pytorch version(unet basic model)☆17Apr 17, 2018Updated 8 years ago
- Pre-processing and post-processing for biomedical image analysis☆18Dec 11, 2024Updated last year
- The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net…☆1,361Jun 17, 2024Updated 2 years ago
- MRI medical image segmentation☆175Feb 10, 2021Updated 5 years ago
- Variant VNet family☆87Dec 28, 2020Updated 5 years ago
- A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation☆1,920Jul 25, 2024Updated 2 years ago
- Attention UNet for Promise12 Prostate Segmentation☆29Jun 24, 2019Updated 7 years ago
- ☆8,994Oct 22, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scripts that have been useful. Includes some analysis of EGSnrc 3ddose files☆30Dec 4, 2017Updated 8 years ago
- sourcecode of multi-planar prostate segmentation (ISBI publication in 2018)☆17Oct 8, 2019Updated 7 years ago
- A New Ensemble Learning Framework for 3D Biomedical Image Segmentation, AAAI, 2019☆16Nov 14, 2018Updated 7 years ago
- SOTA medical image segmentation methods based on various challenges☆1,680Dec 12, 2023Updated 2 years ago
- MRI brain extraction tool☆436Dec 18, 2024Updated last year
- A collection of UNet and hybrid architectures in PyTorch for 2D and 3D Biomedical Image segmentation☆375Aug 2, 2018Updated 8 years ago
- TMI 2018. H-DenseUNet: Hybrid Densely Connected UNet for Liver and Tumor Segmentation from CT Volumes☆570Dec 8, 2022Updated 3 years ago
- ☆94Jun 17, 2019Updated 7 years ago
- TMI dose prediction☆13Jun 8, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A medical imaging framework for Pytorch☆871Apr 26, 2024Updated 2 years ago
- ☆13May 10, 2020Updated 6 years ago
- Library to compute surface distance based performance metrics for segmentation tasks.☆603Feb 19, 2025Updated last year
- Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI☆389Jul 6, 2023Updated 3 years ago
- Pytorch 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation☆2,239Nov 6, 2025Updated 11 months ago
- nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without ma…☆664Oct 8, 2026Updated 3 weeks ago
- Prostate MR Image Segmentation 2012☆138Nov 30, 2020Updated 5 years ago