BrainOdyssey2050 / PiplineLinks
☆36Updated 4 years ago
Alternatives and similar repositories for Pipline
Users that are interested in Pipline are comparing it to the libraries listed below
Sorting:
- ☆37Updated 4 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 3 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 5 months ago
- quantification of behavior across chronic social defeat stress☆10Updated 3 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆70Updated this week
- This is a tutorial for key data analysis steps used by neuroscientists - filtering, spike extraction, PCA, clustering, and spectral analy…☆28Updated 2 years ago
- cortex lab code for electrophysiology☆85Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆63Updated 3 weeks ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆29Updated 2 months ago
- a module for kinematic analysis of deeplabcut outputs☆144Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆135Updated 3 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 6 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- A spike raster plot from spike time stamps with optional trial and group data.☆12Updated 11 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆178Updated 3 months ago
- A curated list of awesome Neuropixels resources.☆117Updated last week
- Code package that allows meta analyses of unsupervised behavior results☆17Updated 4 months ago
- Tutorials for using SpikeInterface on extracellular datasets.☆67Updated last year
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆201Updated last year
- An active learning platform for expert-guided, data efficient discovery of behavior.☆63Updated 4 months ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- MATLAB code for local field potential analysis☆20Updated 3 years ago
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 3 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated last year
- Code for internal lab sharing - polishing has started but is by no means complete☆130Updated last year
- ☆97Updated last week
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆20Updated last week
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Updated last year