MedevaKnowledgeSystems / pymedterminoLinks
☆12Updated 7 years ago
Alternatives and similar repositories for pymedtermino
Users that are interested in pymedtermino are comparing it to the libraries listed below
Sorting:
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated 3 months ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆77Updated 2 years ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 9 months ago
- General tutorials for the setup and use of MedCAT.☆40Updated 6 months ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆154Updated 2 years ago
- ☆221Updated 11 months ago
- Medical Concept Annotation Tool☆513Updated 4 months ago
- ☆101Updated 3 years ago
- This repository contains a corpus of medical case reports with entity and relation annotations in BioC format.☆19Updated 5 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆341Updated 4 years ago
- ☆27Updated 6 months ago
- System for Medical Concept Extraction and Linking☆424Updated last year
- A collection of papers on automated medical coding from free-texts☆150Updated 11 months ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 6 months ago
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆74Updated 2 years ago
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆15Updated 2 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated 2 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆90Updated 2 years ago
- A rule-based Python module for spitting documents into sections.☆12Updated 5 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆91Updated 3 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆72Updated this week
- Winners of the SNOMED CT Entity Linking Challenge☆43Updated last year
- Biomedical Named Entity Recognition and Normalization of Diseases, Chemicals and Genenetic entity classes through the use of state-of-the…☆122Updated 3 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32Updated last year
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆70Updated 7 months ago
- Fast, world class biomedical NER☆87Updated 9 months ago
- all scripts used in gatortron project☆128Updated 2 years ago