MICLab-Unicamp / medseg
Official repository for reproducing COVID and Lung segmentation prediction (old version of MEDPSeg)
☆10Updated last year
Alternatives and similar repositories for medseg:
Users that are interested in medseg are comparing it to the libraries listed below
- Airway segmentation from chest CTs using deep Convolutional Neural Networks☆64Updated 7 months ago
- Automatic classification of tertiary bronchi based on bronchus masks using a rule-based approach.☆39Updated 2 years ago
- NaviAirway: a Bronchiole-sensitive Deep Learning-based Airway Segmentation Pipeline☆47Updated 2 years ago
- ☆22Updated last year
- ☆14Updated 3 years ago
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201…☆62Updated last year
- DICOM RT-Struct to mask☆95Updated 10 months ago
- 3D airway segmentation method☆55Updated 3 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- selected code for 3D-2D image registration using deep learning☆13Updated 4 months ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆65Updated 3 months ago
- Landmark detection engine for 3D medical images (MICCAI workshop 2021)☆40Updated 6 months ago
- Structure and position aware graph neural network for airway labeling☆14Updated 2 years ago
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆75Updated 3 months ago
- Code and data for the "annotation" component of the IPCAI 2020 paper: "Automatic Annotation of Hip Anatomy in Fluoroscopy for Robust and …☆81Updated last year
- The code of paper "Transformer-based 3D U-Net for Pulmonary Vessel Segmentation and Artery-vein Separation from CT images"☆24Updated last year
- Lung Segmentation UNet model on 3D CT scans☆49Updated 5 years ago
- ☆32Updated last year
- Brain vessel segmentation using 3D convolutional neural networks☆42Updated 2 years ago
- This project uses a process known as segmentation to extract individual lung components from CT scans such as the airway, bronchioles, ou…☆25Updated 4 years ago
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆58Updated 4 years ago
- Whole heart segmentation of cardiac CT scans☆13Updated 3 years ago
- ☆24Updated 8 months ago
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆161Updated 4 months ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆28Updated 4 years ago
- [IEEE JBHI, 2023] Towards Connectivity-Aware Pulmonary Airway Segmentation☆15Updated 10 months ago
- XiaoweiXu / ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT☆60Updated last year
- DL-CTA coronary Agatston calcium scoring☆19Updated 3 years ago
- ☆53Updated 3 weeks ago