irisstone / glmhmmLinks
code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)
☆31Updated last year
Alternatives and similar repositories for glmhmm
Users that are interested in glmhmm are comparing it to the libraries listed below
Sorting:
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆50Updated 2 years ago
- ☆54Updated 6 months ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆33Updated 3 weeks ago
- ☆24Updated 5 years ago
- jPCA for Neural Data Analysis in Python☆50Updated 2 years ago
- Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors☆29Updated 7 months ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆54Updated 6 months ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 11 months ago
- Decoding and geometrical analysis of neural activity with built-in best practices☆45Updated 5 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 5 years ago
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆54Updated 4 years ago
- methods & simulation code to measure sequential replay☆42Updated 4 years ago
- ☆58Updated 3 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆71Updated 5 years ago
- ☆20Updated 2 months ago
- "Approaches to Study Neural Circuits" course☆66Updated 9 months ago
- Tutorial☆11Updated 4 years ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆103Updated this week
- Preferential Subspace Identification Algorithm☆54Updated 3 months ago
- A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…☆16Updated 5 months ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated 2 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆66Updated this week
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 3 years ago
- A Guide to Reconstructing Dynamical Systems from Neural Measurements Using Recurrent Neural Networks☆38Updated last year
- Machine Learning Methods for Neural Data Analysis☆19Updated 4 months ago
- ☆26Updated 3 months ago
- A Matlab interface for reading and writing NWB files☆55Updated 2 weeks ago
- Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals☆24Updated 5 months ago
- Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.☆12Updated 5 years ago
- DataHigh: A graphical user interface for visualizing and interacting with high-dimensional neural activity☆17Updated 6 years ago