Alternatives and similar repositories for glmhmm

Users that are interested in glmhmm are comparing it to the libraries listed below

• nicholas-roy / psytrack
  ☆56Updated 8 months ago
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆53Updated 2 years ago
• murthylab / GLMHMM
  ☆24Updated 5 years ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆32Updated 2 months ago
• glaserlab / sca
  Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors
  ☆28Updated 9 months ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆57Updated 8 months ago
• bantin / jPCA
  jPCA for Neural Data Analysis in Python
  ☆52Updated 2 years ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 6 years ago
• slinderman / ml4nd
  Machine Learning Methods for Neural Data Analysis
  ☆19Updated 6 months ago
• rajanlab / CURBD
  Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
  ☆55Updated 4 years ago
• pillowlab / GLMspiketraintutorial_python
  ☆60Updated 3 years ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆51Updated last month
• lindermanlab / PPSeq.jl
  Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains
  ☆70Updated 2 years ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆110Updated this week
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆71Updated 5 years ago
• lposani / decodanda
  Decoding and geometrical analysis of neural activity with built-in best practices
  ☆46Updated 7 months ago
• spiketools / spiketools
  Tools for analyzing spiking data from single-neuron recodings.
  ☆29Updated last month
• NeuroNetMem / PowerPixelsPipeline
  ☆22Updated this week
• PeyracheLab / Class-Decoding
  Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.
  ☆12Updated 5 years ago
• jniediek / combinato
  Automatic spike sorting, cluster visualization, spike sorting GUIs
  ☆46Updated last month
• BenjoCowley / DataHigh
  DataHigh: A graphical user interface for visualizing and interacting with high-dimensional neural activity
  ☆18Updated 6 years ago
• PeyracheLab / StarterPack
  Tutorial
  ☆11Updated 4 years ago
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 11 months ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆71Updated 2 weeks ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆43Updated 6 years ago
• mwshinn / PyDDM
  A drift-diffusion modeling (DDM) framework for Python
  ☆104Updated last month
• SpikeInterface / spikemetrics
  Metrics for spike sorting validation/quality control
  ☆14Updated 4 years ago
• ShanechiLab / PyPSID
  Preferential Subspace Identification Algorithm
  ☆54Updated 5 months ago
• kstach01 / CogModelingRNNsTutorial
  ☆55Updated last year
• YunzheLiu / TDLM
  methods & simulation code to measure sequential replay
  ☆42Updated 4 years ago