Alternatives and similar repositories for FAIRDataCube

Users that are interested in FAIRDataCube are comparing it to the libraries listed below

• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆132Updated last week
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆58Updated this week
• elixir-europe / BioHackathon-projects-2020
  This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage p…
  ☆22Updated 2 years ago
• CLO-ontology / CLO
  Communitiy-based Cell Line Ontology
  ☆18Updated last year
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆56Updated 2 weeks ago
• Knowledge-Graph-Hub / kg-obo
  A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
  ☆32Updated last year
• mapping-commons / mh_mapping_initiative
  Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.
  ☆13Updated last month
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆79Updated last month
• NCI-Thesaurus / thesaurus-obo-edition
  OBO Library edition of NCIt
  ☆24Updated last week
• ncats / stitcher
  A stitching platform for InXight
  ☆15Updated 3 months ago
• pato-ontology / pato
  PATO - the Phenotype And Trait Ontology
  ☆59Updated 2 weeks ago
• obi-ontology / obi
  The Ontology for Biomedical Investigations
  ☆85Updated last week
• ISA-tools / isa-api
  ISA tools API
  ☆43Updated 2 months ago
• phenopackets / phenopacket-format
  ☆26Updated 5 years ago
• OBOFoundry / purl.obolibrary.org
  A system for managing OBO PURLs
  ☆83Updated last week
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆25Updated 10 months ago
• monarch-initiative / mondo
  Mondo Disease Ontology
  ☆259Updated this week
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• obophenotype / ncbitaxon
  Build for NCBITaxon
  ☆29Updated 4 months ago
• elixir-europe / biohackathon-projects-2021
  For BioHackathon Europe 2021.
  ☆30Updated 2 years ago
• obophenotype / uberon
  An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
  ☆141Updated this week
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆14Updated 5 months ago
• microbiomedata / nmdc-schema
  National Microbiome Data Collaborative (NMDC) unified data model
  ☆43Updated this week
• phenopackets / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆87Updated 9 months ago
• EBISPOT / ols4
  The EMBL-EBI Ontology Lookup Service (OLS)
  ☆66Updated this week
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 3 years ago
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated last week
• monarch-initiative / phenopacket-store
  Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.
  ☆23Updated last month
• monarch-initiative / vertebrate-breed-ontology
  ☆12Updated 5 months ago
• evidenceontology / evidenceontology
  Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…
  ☆50Updated 3 weeks ago