DurstewitzLab / CNS-2023
A Guide to Reconstructing Dynamical Systems from Neural Measurements Using Recurrent Neural Networks
☆25Updated 5 months ago
Related projects: ⓘ
- Preferential Subspace Identification Algorithm☆47Updated 2 weeks ago
- Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.☆39Updated last year
- Dynamical Similarity Analysis code accompanying the paper "Beyond Geometry: comparing the temporal structure of computation in neural cir…☆36Updated 2 months ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆31Updated 11 months ago
- ☆26Updated 6 months ago
- Preferential Subspace Identification Algorithm☆44Updated 7 months ago
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆48Updated 3 years ago
- ☆46Updated 2 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆24Updated 2 years ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆32Updated 4 months ago
- State-space Oscillator Modeling And Time-series Analysis (SOMATA) is a Python library for state-space neural signal processing algorithms…☆20Updated last month
- jPCA for Neural Data Analysis in Python☆42Updated last year
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆43Updated last week
- ☆17Updated 5 months ago
- Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals☆11Updated last month
- ☆46Updated 5 months ago
- ☆17Updated 2 years ago
- A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆19Updated last year
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆41Updated last year
- A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…☆10Updated 10 months ago
- code to fit GLMs, HMMs, and GLM-HMMs (aka IO-HMMs)☆24Updated last month
- A PyTorch implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆80Updated this week
- ☆28Updated 2 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆23Updated 11 months ago
- This reading list is centered around the practical application of linear dynamical systems models to predict neural data☆35Updated 2 years ago
- Sparse component analysis☆24Updated 3 months ago
- ☆11Updated last month
- Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…☆27Updated last month
- Bayesian learning and inference for state space models☆10Updated 2 years ago
- Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…☆30Updated 6 years ago